RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 ATF7IPQ6VMQ6 1270 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 FAM83AQ86UY5 434 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 FRAT1Q92837 279 aaPredicted RBP11.72□□□□□ -0.53
NUP50-205ENST00000419387 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
NUP50-205ENST00000419387 SEMA3EO15041 775 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 SRGAP3O43295 1099 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 FKTNO75072 461 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 PHKA1P46020 1223 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.71□□□□□ -0.53
NUP50-205ENST00000419387 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 TNNQ9UQP3 1299 aa11.71□□□□□ -0.53
NUP50-205ENST00000419387 SALL1Q9NSC2 1324 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
NUP50-205ENST00000419387 GNAI2P04899 355 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 LDHBP07195 334 aaKnown RBP11.7□□□□□ -0.54
NUP50-205ENST00000419387 PRDX5P30044 214 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 ADORA1P30542 326 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 TIMM10P62072 90 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 HNRNPUQ00839 825 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP50-205ENST00000419387 MLLT1Q03111 559 aaPredicted RBP11.7□□□□□ -0.54
NUP50-205ENST00000419387 VGLL4Q14135 290 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP50-205ENST00000419387 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 CSADQ9Y600 493 aa11.7□□□□□ -0.54
NUP50-205ENST00000419387 TFCP2Q12800 502 aa11.69□□□□□ -0.54
NUP50-205ENST00000419387 DIXDC1Q155Q3 683 aa11.69□□□□□ -0.54
NUP50-205ENST00000419387 ZKSCAN2Q63HK3 967 aa11.69□□□□□ -0.54
NUP50-205ENST00000419387 FAM151AQ8WW52 585 aa11.69□□□□□ -0.54
NUP50-205ENST00000419387 MS4A4AQ96JQ5 239 aa11.69□□□□□ -0.54
NUP50-205ENST00000419387 PTPN18Q99952 460 aa11.69□□□□□ -0.54
NUP50-205ENST00000419387 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
NUP50-205ENST00000419387 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
NUP50-205ENST00000419387 GTF2A2P52657 109 aa11.68□□□□□ -0.54
NUP50-205ENST00000419387 DCAF15Q66K64 600 aa11.68□□□□□ -0.54
NUP50-205ENST00000419387 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
NUP50-205ENST00000419387 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
NUP50-205ENST00000419387 XAGE2Q96GT9 111 aa11.68□□□□□ -0.54
NUP50-205ENST00000419387 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
NUP50-205ENST00000419387 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
NUP50-205ENST00000419387 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
NUP50-205ENST00000419387 TCP10Q12799 353 aa11.67□□□□□ -0.54
NUP50-205ENST00000419387 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
NUP50-205ENST00000419387 CRHR2Q13324 411 aa11.67□□□□□ -0.54
NUP50-205ENST00000419387 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
NUP50-205ENST00000419387 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
NUP50-205ENST00000419387 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
NUP50-205ENST00000419387 TMEM57Q8N5G2 664 aa11.67□□□□□ -0.54
NUP50-205ENST00000419387 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
NUP50-205ENST00000419387 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
NUP50-205ENST00000419387 WRNIP1Q96S55 665 aa11.67□□□□□ -0.54
NUP50-205ENST00000419387 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
NUP50-205ENST00000419387 MYH13Q9UKX3 1938 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
NUP50-205ENST00000419387 CCL15-CCL14A0A0B4J2E2 113 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 PNMA6EA0A0J9YXQ4 647 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 SOX10P56693 466 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 NFIAQ12857 509 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 CCL15Q16663 113 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
NUP50-205ENST00000419387 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 SLF2Q8IX21 1173 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 BRI3BPQ8WY22 251 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
NUP50-205ENST00000419387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
NUP50-205ENST00000419387 OTOFQ9HC10 1997 aa11.65□□□□□ -0.54
NUP50-205ENST00000419387 LAMB1P07942 1786 aa11.65□□□□□ -0.54
NUP50-205ENST00000419387 GORABQ5T7V8 394 aa11.65□□□□□ -0.54
NUP50-205ENST00000419387 DZIP1Q86YF9 867 aaKnown RBP11.65□□□□□ -0.54
NUP50-205ENST00000419387 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
NUP50-205ENST00000419387 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
NUP50-205ENST00000419387 ZFYVE28Q9HCC9 887 aa11.65□□□□□ -0.54
NUP50-205ENST00000419387 ZNF112Q9UJU3 913 aa11.65□□□□□ -0.54
NUP50-205ENST00000419387 TRIM17Q9Y577 477 aa11.65□□□□□ -0.54
NUP50-205ENST00000419387 GAKO14976 1311 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 IRF6O14896 467 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 CETPP11597 493 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 INPP5BP32019 993 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 ATP8B2P98198 1209 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 SP3Q02447 781 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 PPATQ06203 517 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 PPIL2Q13356 520 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 SNAPC2Q13487 334 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
NUP50-205ENST00000419387 ERICH6Q7L0X2 663 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms