RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 SEC31BQ9NQW1 1179 aa4.44□□□□□ -1.7
RPS4XP3-201ENST00000398541 KCNK4Q9NYG8 393 aa4.44□□□□□ -1.7
RPS4XP3-201ENST00000398541 FOXD3Q9UJU5 478 aaPredicted RBP4.44□□□□□ -1.7
RPS4XP3-201ENST00000398541 SCO2A0A1W2PP80 73 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 H3BRJ5 948 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 TM4SF5O14894 197 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 DDX3YO15523 660 aaKnown RBP4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 WISP1O95388 367 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 EDN3P14138 238 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 GNA15P30679 374 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 RACK1P63244 317 aaKnown RBP4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 SERINC3Q13530 473 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 ENOX2Q16206 610 aaKnown RBP4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 ZNF394Q53GI3 561 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 NBPF6Q5VWK0 638 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 PRR23CQ6ZRP0 262 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 Q6ZS46 218 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 ACAD11Q709F0 780 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 FILIP1Q7Z7B0 1213 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 GJD3Q8N144 294 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 KLHDC7BQ96G42 594 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 NBPF4Q96M43 638 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 OSMRQ99650 979 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 IFT57Q9NWB7 429 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 WWC3Q9ULE0 1092 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 PCDHGB7Q9Y5F8 929 aa4.43□□□□□ -1.7
RPS4XP3-201ENST00000398541 DNAJC6O75061 913 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 ADAM11O75078 769 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 PEX14O75381 377 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 GJA8P48165 433 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 PIP4K2BP78356 416 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 PTPN12Q05209 780 aaKnown RBP4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 DUOXA2Q1HG44 320 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 ALG1LQ6GMV1 187 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 USP48Q86UV5 1035 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 CKAP2LQ8IYA6 745 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 RPUSD2Q8IZ73 545 aaKnown RBP4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 TMEM102Q8N9M5 508 aaPredicted RBP4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 UBASH3BQ8TF42 649 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 SLC7A3Q8WY07 619 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 WNT8BQ93098 351 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 MKL1Q969V6 931 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 NXPE3Q969Y0 559 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 SETDB2Q96T68 719 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 ZKSCAN3Q9BRR0 538 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 SOX13Q9UN79 622 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 PRKAB1Q9Y478 270 aa4.42□□□□□ -1.7
RPS4XP3-201ENST00000398541 PNMA6FA0A0J9YX94 578 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 U2SURPO15042 1029 aaKnown RBP4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 CTSHP09668 335 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 PLEKHG4Q58EX7 1191 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 KIAA1211Q6ZU35 1233 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 SMC5Q8IY18 1101 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 FBF1Q8TES7 1133 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 BSNDQ8WZ55 320 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 UBL7Q96S82 380 aaPredicted RBP4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 CEP41Q9BYV8 373 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 TMX1Q9H3N1 280 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 SPC25Q9HBM1 224 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 ZFYVE28Q9HCC9 887 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 OSGEPQ9NPF4 335 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 LATS2Q9NRM7 1088 aa4.41□□□□□ -1.7
RPS4XP3-201ENST00000398541 S100BP04271 92 aaPredicted RBP4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 POLR3DP05423 398 aaPredicted RBP4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 ATF4P18848 351 aaPredicted RBP4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 ARL4DP49703 201 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 NLRP12P59046 1061 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 IKBKEQ14164 716 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 ARTNQ5T4W7 220 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 PEAR1Q5VY43 1037 aaPredicted RBP4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 HGSNATQ68CP4 663 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 HS2ST1Q7LGA3 356 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 VN1R5Q7Z5H4 357 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 ASAP3Q8TDY4 903 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 STAG1Q8WVM7 1258 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 FRMD6Q96NE9 622 aa4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 BHLHE41Q9C0J9 482 aaPredicted RBP4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 DDX56Q9NY93 547 aaKnown RBP4.4□□□□□ -1.71
RPS4XP3-201ENST00000398541 SOX1O00570 391 aaPredicted RBP4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 DHX15O43143 795 aaKnown RBP4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 FSTP19883 344 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 C19orf57Q0VDD7 668 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 CCAR1Q8IX12 1150 aaKnown RBP4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 CCDC146Q8IYE0 955 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 PMM1Q92871 262 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 UTP4Q969X6 686 aaKnown RBP4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 GPRASP2Q96D09 838 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 RNPC3Q96LT9 517 aaKnown RBP4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 ZFP64Q9NPA5 681 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 TYW1Q9NV66 732 aaKnown RBP4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 GABBR1Q9UBS5 961 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 RAXQ9Y2V3 346 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 AK5Q9Y6K8 562 aa4.39□□□□□ -1.71
RPS4XP3-201ENST00000398541 METTL12A8MUP2 240 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 PPP1R12AO14974 1030 aaPredicted RBP4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 PAK2Q13177 524 aa4.38□□□□□ -1.71
RPS4XP3-201ENST00000398541 LRP8Q14114 963 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms