RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.193e-6■■■■□ 26.6
PDPK1-202ENST00000342085 LIN9Q5TKA1 542 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 NECAB1Q8N987 351 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 USTQ9Y2C2 406 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 SPOPO43791 374 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
PDPK1-202ENST00000342085 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 NCAPGQ9BPX3 1015 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 PAG1Q9NWQ8 432 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 DAPK1P53355 1430 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
PDPK1-202ENST00000342085 MTUS1Q9ULD2 1270 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 TLDC2A0PJX2 215 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 Q3C1V9 767 aa16.21■□□□□ 0.19
PDPK1-202ENST00000342085 RXRAP19793 462 aa16.21■□□□□ 0.18
PDPK1-202ENST00000342085 DPP9Q86TI2 863 aa16.21■□□□□ 0.18
PDPK1-202ENST00000342085 TTC14Q96N46 770 aa16.21■□□□□ 0.18
PDPK1-202ENST00000342085 PLEKHH1Q9ULM0 1364 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
PDPK1-202ENST00000342085 UBXN1Q04323 297 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 CAPN9O14815 690 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 CFBP00751 764 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 BSPRYQ5W0U4 402 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 Q6ZUG5 572 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 CCNT1O60563 726 aaKnown RBP16.2■□□□□ 0.18
PDPK1-202ENST00000342085 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 TCEANC2Q96MN5 208 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 FAM184BQ9ULE4 1060 aa16.2■□□□□ 0.18
PDPK1-202ENST00000342085 ALDH1B1P30837 517 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 CCDC110Q8TBZ0 833 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 CAPZA3Q96KX2 299 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 GRM8O00222 908 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 KIAA1841Q6NSI8 718 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 C1orf228Q6PIY5 440 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 SLC12A2P55011 1212 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 IGBP1P78318 339 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 CSRNP2Q9H175 543 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 USP25Q9UHP3 1055 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 HSPA4P34932 840 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 ARHGEF16Q5VV41 709 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 TNRQ92752 1358 aa16.19■□□□□ 0.18
PDPK1-202ENST00000342085 HCLS1P14317 486 aaPredicted RBP16.18■□□□□ 0.18
PDPK1-202ENST00000342085 TNFAIP3P21580 790 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 DCUN1D2Q6PH85 259 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 SLC1A4P43007 532 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 STX17P56962 302 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 SEPT14Q6ZU15 432 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 IGF1RP08069 1367 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 CALCOCO2Q13137 446 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 CFTRP13569 1480 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 TRAF5O00463 557 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 IPO4Q8TEX9 1081 aaKnown RBP16.18■□□□□ 0.18
PDPK1-202ENST00000342085 CCDC42Q96M95 316 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 RPS6KC1Q96S38 1066 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 APOL6Q9BWW8 343 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 P4HA1P13674 534 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 RNASELQ05823 741 aaKnown RBP16.18■□□□□ 0.18
PDPK1-202ENST00000342085 TMTC4Q5T4D3 741 aa16.18■□□□□ 0.18
PDPK1-202ENST00000342085 MTRF1LQ9UGC7 380 aaKnown RBP16.18■□□□□ 0.18
PDPK1-202ENST00000342085 ATRIPQ8WXE1 791 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 IDI1Q13907 227 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 CCDC129Q6ZRS4 1044 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 TESPA1A2RU30 521 aaPredicted RBP16.17■□□□□ 0.18
PDPK1-202ENST00000342085 TYW5A2RUC4 315 aaKnown RBP16.17■□□□□ 0.18
PDPK1-202ENST00000342085 TNFAIP1Q13829 316 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 ERCC6LQ2NKX8 1250 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 IFT81Q8WYA0 676 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 MMS19Q96T76 1030 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 ST7Q9NRC1 585 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 SND1Q7KZF4 910 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDPK1-202ENST00000342085 ZBTB9Q96C00 473 aa16.17■□□□□ 0.18
PDPK1-202ENST00000342085 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
PDPK1-202ENST00000342085 ADGRL1O94910 1474 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 TCP10L2B9ZVM9 353 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
PDPK1-202ENST00000342085 SPAG1Q07617 926 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 NLRX1Q86UT6 975 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 ANKS4BQ8N8V4 417 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 RAB3IPQ96QF0 476 aaPredicted RBP16.16■□□□□ 0.18
PDPK1-202ENST00000342085 PCDH11XQ9BZA7 1347 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 PCDH11YQ9BZA8 1340 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 ARPP19P56211 112 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
PDPK1-202ENST00000342085 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 RBM28Q9NW13 759 aaKnown RBP16.16■□□□□ 0.18
PDPK1-202ENST00000342085 KCNG4Q8TDN1 519 aa16.16■□□□□ 0.18
PDPK1-202ENST00000342085 CALUO43852 315 aaPredicted RBP16.15■□□□□ 0.18
PDPK1-202ENST00000342085 ZNF165P49910 485 aa16.15■□□□□ 0.18
PDPK1-202ENST00000342085 RILPL1Q5EBL4 403 aa16.15■□□□□ 0.18
PDPK1-202ENST00000342085 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
PDPK1-202ENST00000342085 AATFQ9NY61 560 aaKnown RBP eCLIP16.15■□□□□ 0.18
PDPK1-202ENST00000342085 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms