RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 MECOMQ03112 1051 aa6.91□□□□□ -1.3
PATL1-201ENST00000300146 CLASRPQ8N2M8 674 aaKnown RBP6.91□□□□□ -1.3
PATL1-201ENST00000300146 PALD1Q9ULE6 856 aa6.91□□□□□ -1.3
PATL1-201ENST00000300146 ZHX2Q9Y6X8 837 aa6.91□□□□□ -1.3
PATL1-201ENST00000300146 CCL15-CCL14A0A0B4J2E2 113 aa6.9□□□□□ -1.3
PATL1-201ENST00000300146 CT47B1P0C2W7 299 aaPredicted RBP6.9□□□□□ -1.3
PATL1-201ENST00000300146 ATP8B2P98198 1209 aa6.9□□□□□ -1.3
PATL1-201ENST00000300146 TAF1CQ15572 869 aaPredicted RBP6.9□□□□□ -1.3
PATL1-201ENST00000300146 CCL15Q16663 113 aa6.9□□□□□ -1.3
PATL1-201ENST00000300146 MAGEB6Q8N7X4 407 aa6.9□□□□□ -1.3
PATL1-201ENST00000300146 JMYQ8N9B5 988 aa6.9□□□□□ -1.3
PATL1-201ENST00000300146 BRCA2P51587 3418 aa6.9□□□□□ -1.3
PATL1-201ENST00000300146 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.31
PATL1-201ENST00000300146 PEX10O60683 326 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 GDF11O95390 407 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 MCAMP43121 646 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 TNNI3KQ59H18 835 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 APOBEC3HQ6NTF7 200 aaKnown RBP6.9□□□□□ -1.31
PATL1-201ENST00000300146 COPRSQ9NQ92 184 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 FPGT-TNNI3KV9GXZ4 949 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 COL24A1Q17RW2 1714 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 KIAA1551Q9HCM1 1747 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 A0A0C4DFX4 3053 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 VGLL4Q14135 290 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 IFFO2Q5TF58 517 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 RASAL3Q86YV0 1011 aa6.9□□□□□ -1.31
PATL1-201ENST00000300146 CCAR1Q8IX12 1150 aaKnown RBP6.9□□□□□ -1.31
PATL1-201ENST00000300146 PIAS4Q8N2W9 510 aaPredicted RBP6.9□□□□□ -1.31
PATL1-201ENST00000300146 ZNF831Q5JPB2 1677 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 TRIOBPQ9H2D6 2365 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 HMMRO75330 724 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 USP2O75604 605 aaPredicted RBP6.89□□□□□ -1.31
PATL1-201ENST00000300146 VGLL2Q8N8G2 317 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 CRBNQ96SW2 442 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 CWC22Q9HCG8 908 aaKnown RBP6.89□□□□□ -1.31
PATL1-201ENST00000300146 CPA4Q9UI42 421 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 ARFGEF1Q9Y6D6 1849 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 IRF6O14896 467 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 ANKRD45Q5TZF3 282 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 CEP85Q6P2H3 762 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 ZNF296Q8WUU4 475 aaPredicted RBP6.89□□□□□ -1.31
PATL1-201ENST00000300146 ABHD8Q96I13 439 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 MCOLN1Q9GZU1 580 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 PICK1Q9NRD5 415 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 TOMM22Q9NS69 142 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 DBNLQ9UJU6 430 aaKnown RBP6.89□□□□□ -1.31
PATL1-201ENST00000300146 FER1L6Q2WGJ9 1857 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 DDTLA6NHG4 134 aaPredicted RBP6.89□□□□□ -1.31
PATL1-201ENST00000300146 POLR3DP05423 398 aaPredicted RBP6.89□□□□□ -1.31
PATL1-201ENST00000300146 MAP2K2P36507 400 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 MAP3K9P80192 1104 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 RAB3GAP1Q15042 981 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 ANKRD13AQ8IZ07 590 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 RHPN1Q8TCX5 695 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 ARHGAP45Q92619 1136 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.89□□□□□ -1.31
PATL1-201ENST00000300146 PCDH10Q9P2E7 1040 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 DDX19BQ9UMR2 479 aa6.89□□□□□ -1.31
PATL1-201ENST00000300146 LAMB4A4D0S4 1761 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 SNED1Q8TER0 1413 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 FGFR2P21802 821 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 SHROOM1Q2M3G4 852 aaPredicted RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 SPDYE2Q495Y8 402 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 SH3RF3Q8TEJ3 882 aaPredicted RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 SMCR8Q8TEV9 937 aaPredicted RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 NRXN2Q9P2S2 1712 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 KIF13BQ9NQT8 1826 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 FMNL1O95466 1100 aaPredicted RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 CYP2C8P10632 490 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 SLC9C2Q5TAH2 1124 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 CD99L2Q8TCZ2 262 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 FEZ1Q99689 392 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 DDX4Q9NQI0 724 aaKnown RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 SERPINA10Q9UK55 444 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 BCORQ6W2J9 1755 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 BRCA1P38398 1863 aaKnown RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 SCN9AQ15858 1988 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 SPP2Q13103 211 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 SPRYD7Q5W111 196 aa6.88□□□□□ -1.31
PATL1-201ENST00000300146 SPTY2D1Q68D10 685 aaPredicted RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 PIH1D3Q9NQM4 214 aaKnown RBP6.88□□□□□ -1.31
PATL1-201ENST00000300146 IGF2BP3O00425 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
PATL1-201ENST00000300146 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.87□□□□□ -1.31
PATL1-201ENST00000300146 SDR42E1Q8WUS8 393 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 PAGR1Q9BTK6 254 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 PGAP2Q9UHJ9 254 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 MINDY4BA8MYZ0 360 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 NPM3O75607 178 aaKnown RBP6.87□□□□□ -1.31
PATL1-201ENST00000300146 WDHD1O75717 1129 aaPredicted RBP6.87□□□□□ -1.31
PATL1-201ENST00000300146 LDHCP07864 332 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 SLC10A3P09131 477 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 UTYO14607 1347 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 AK9Q5TCS8 1911 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 CYP2D7A0A087X1C5 515 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 TRIM6-TRIM34B2RNG4 842 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 GPR25O00155 361 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 CYP2E1P05181 493 aaPredicted RBP6.87□□□□□ -1.31
PATL1-201ENST00000300146 MS4A1P11836 297 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 OTUD7BQ6GQQ9 843 aa6.87□□□□□ -1.31
PATL1-201ENST00000300146 OTUD7AQ8TE49 926 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms