RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IFNL3Q8IZI9 196 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 CCDC69A6NI79 296 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 PUM3Q15397 648 aaKnown RBP16.97■□□□□ 0.31
CNOT3-201ENST00000221232 SMIM5Q71RC9 77 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.97■□□□□ 0.31
CNOT3-201ENST00000221232 LPIN2Q92539 896 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 CHMP4CQ96CF2 233 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 EPB41L4AQ9HCS5 686 aaPredicted RBP16.97■□□□□ 0.31
CNOT3-201ENST00000221232 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
CNOT3-201ENST00000221232 UBE3CQ15386 1083 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 HSP90AA4PQ58FG1 418 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 POLR3EQ9NVU0 708 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 ABCC6O95255 1503 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.31
CNOT3-201ENST00000221232 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 KCNQ4P56696 695 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 FBXL16Q8N461 479 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 NAT10Q9H0A0 1025 aaKnown RBP16.96■□□□□ 0.31
CNOT3-201ENST00000221232 PRDM10Q9NQV6 1147 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 IFNKQ9P0W0 207 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 ABCF2Q9UG63 623 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
CNOT3-201ENST00000221232 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 ZMYM6O95789 1325 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 TCRBV5S4A2TA0A5A2 114 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
CNOT3-201ENST00000221232 TDO2P48775 406 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 AXDND1Q5T1B0 1012 aaPredicted RBP16.95■□□□□ 0.3
CNOT3-201ENST00000221232 BRAPQ7Z569 592 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 YEATS4O95619 227 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 CAVIN2O95810 425 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 ATP6V1AP38606 617 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 MINDY4BA8MYZ0 360 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 SLC5A1P13866 664 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 MAP3K12Q12852 859 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 CPLX2Q6PUV4 134 aaKnown RBP16.95■□□□□ 0.3
CNOT3-201ENST00000221232 LCORLQ8N3X6 602 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 LY9Q9HBG7 655 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 LRP2BPQ9P2M1 347 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 SLC4A4Q9Y6R1 1079 aa16.95■□□□□ 0.3
CNOT3-201ENST00000221232 A0A1W2PQ27 194 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 A0A1W2PQ64 194 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 A0A1W2PQD8 194 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 PATL2C9JE40 543 aaKnown RBP16.94■□□□□ 0.3
CNOT3-201ENST00000221232 UQCRFS1P1P0C7P4 283 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 SYKP43405 635 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 PNOCQ13519 176 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 TRIM29Q14134 588 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 TICAM2Q86XR7 235 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 XPO4Q9C0E2 1151 aaKnown RBP16.94■□□□□ 0.3
CNOT3-201ENST00000221232 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
CNOT3-201ENST00000221232 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 PARP4Q9UKK3 1724 aaKnown RBP16.94■□□□□ 0.3
CNOT3-201ENST00000221232 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 TMC6Q7Z403 805 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 MRFAP1L1Q96HT8 127 aa16.94■□□□□ 0.3
CNOT3-201ENST00000221232 hCG_1642624A0A1W2PR95 340 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 SLC39A14Q15043 492 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 SARM1Q6SZW1 724 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 NIP7Q9Y221 180 aaKnown RBP eCLIP16.93■□□□□ 0.3
CNOT3-201ENST00000221232 NWD2Q9ULI1 1742 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 BTBD18B2RXH4 712 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 ATP1A3P13637 1013 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 ARID4AP29374 1257 aaPredicted RBP16.93■□□□□ 0.3
CNOT3-201ENST00000221232 CBX1P83916 185 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 SHC4Q6S5L8 630 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 MFSD6Q6ZSS7 791 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 SDR42E1Q8WUS8 393 aa16.93■□□□□ 0.3
CNOT3-201ENST00000221232 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
CNOT3-201ENST00000221232 FGFR2P21802 821 aa16.92■□□□□ 0.3
CNOT3-201ENST00000221232 BICDL1Q6ZP65 573 aa16.92■□□□□ 0.3
CNOT3-201ENST00000221232 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.92■□□□□ 0.3
CNOT3-201ENST00000221232 V9GYY5 206 aaPredicted RBP16.92■□□□□ 0.3
CNOT3-201ENST00000221232 FOXN1O15353 648 aa16.92■□□□□ 0.3
CNOT3-201ENST00000221232 CMA1P23946 247 aa16.92■□□□□ 0.3
CNOT3-201ENST00000221232 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.3
CNOT3-201ENST00000221232 IL6STP40189 918 aaPredicted RBP16.92■□□□□ 0.3
CNOT3-201ENST00000221232 SSRP1Q08945 709 aaKnown RBP16.92■□□□□ 0.3
CNOT3-201ENST00000221232 NBPF11Q86T75 865 aa16.92■□□□□ 0.3
CNOT3-201ENST00000221232 UTP14AQ9BVJ6 771 aaKnown RBP16.92■□□□□ 0.3
CNOT3-201ENST00000221232 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
CNOT3-201ENST00000221232 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
CNOT3-201ENST00000221232 NTRK3Q16288 839 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 CDKL5O76039 1030 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 CDC25BP30305 580 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 GRIN1Q05586 938 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 CEP135Q66GS9 1140 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 MROH5Q6ZUA9 1318 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 BCL9O00512 1426 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 NPHP1O15259 732 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 GYG1P46976 350 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms