RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Ctr9Q62018 1173 aaKnown RBP18.02■□□□□ 0.48
Ldb3-208ENSMUST00000228044 Slc51aQ8R000 340 aa18.02■□□□□ 0.48
Ldb3-208ENSMUST00000228044 Mrpl44Q9CY73 333 aaKnown RBP18.02■□□□□ 0.48
Ldb3-208ENSMUST00000228044 Tnni2P13412 182 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Gadd45bP22339 160 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Tpcn2Q8BWC0 731 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Sall1Q9ER74 1322 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Myh6Q02566 1938 aaKnown RBP18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Dhx16G3X8X0 1044 aaKnown RBP18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Tmed8Q3UHI4 326 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ezh2Q61188 746 aaKnown RBP18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ccdc66Q6NS45 935 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Tango6Q8C3S2 1079 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Paf1Q8K2T8 535 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Mad1l1Q9WTX8 717 aaKnown RBP18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Itgb4A2A863 1818 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Btaf1E9QAE3 1848 aa18.01■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Spryd3E9Q9B3 442 aa18■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Cyp26a1O55127 497 aa18■□□□□ 0.47
Ldb3-208ENSMUST00000228044 PcQ05920 1178 aa18■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Hps6Q8BLY7 805 aa18■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Efcc1Q9JJF6 558 aa18■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Frmpd3A0A140LIW3 1774 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Chrna5Q2MKA5 467 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ano1Q8BHY3 960 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ccdc85cE9Q6B2 420 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ppp4cP97470 307 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Mum1l1Q4VA55 681 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Myl10Q62082 202 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Atp2b4Q6Q477 1205 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Otop3Q80UF9 577 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 VmacQ8BP01 174 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ccdc39Q9D5Y1 937 aa17.99■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Rgs12Q8CGE9 1381 aa17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 PnnO35691 725 aaKnown RBP17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Atp6v1aP50516 617 aaKnown RBP17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 XpcP51612 930 aa17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ppfia3P60469 1194 aa17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 AsnsQ61024 561 aa17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Bola3Q8CEI1 110 aa17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 DymQ8CHY3 669 aa17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ccdc47Q9D024 483 aaKnown RBP17.98■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Metap2O08663 478 aaKnown RBP17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Me1P06801 572 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Tmx3Q8BXZ1 456 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 9230110C19RikQ8CC70 267 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Sirt2Q8VDQ8 389 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Znf638Q61464 1960 aaKnown RBP17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Atp8b3Q6UQ17 1335 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Tsc2Q61037 1814 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Naaladl2A0A0N4SUJ3 795 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Gm20425E9Q035 978 aaKnown RBP17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 SrprbP47758 269 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Mtx1P47802 317 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Nell2Q61220 819 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Insm1Q63ZV0 521 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Ttll4Q80UG8 1193 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Rcan1Q9JHG6 198 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Myoz2Q9JJW5 264 aa17.97■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Lamb1P02469 1786 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Usp17lbE9Q9U0 468 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Abl1P00520 1123 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Terf1P70371 421 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Babam1Q3UI43 333 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 U2af1l4Q8BGJ9 220 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Terb1Q8C0V1 768 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Stn1Q8K2X3 378 aa17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Gtf2iQ9ESZ8 998 aaKnown RBP17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Zswim8Q3UHH1 1832 aaKnown RBP17.96■□□□□ 0.47
Ldb3-208ENSMUST00000228044 Lmnb1P14733 588 aaKnown RBP17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Rpusd2Q149F1 553 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Ckap2Q3V1H1 664 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 WtapQ9ER69 396 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Suclg2Q9Z2I8 433 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 FosbP13346 338 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Sec23aQ01405 765 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 IarsQ8BU30 1262 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Skor1Q8BX46 964 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Zfp317Q8C0Q5 607 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Tbc1d23Q8K0F1 684 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Terf2ipQ91VL8 393 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Glipr1l2Q9CQ35 332 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Cnpy3Q9DAU1 276 aa17.95■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Tcof1O08784 1320 aaKnown RBP17.94■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Nap1l3Q794H2 544 aa17.94■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Jag1Q9QXX0 1218 aa17.94■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Igbp1bQ9QZ29 343 aa17.94■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Adam7O35227 789 aa17.93■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Ccdc178Q8CDV0 866 aa17.93■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Srgap1Q91Z69 1062 aa17.93■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Gm9992B2RWK3 458 aa17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Kifc2O08672 792 aa17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Cd22P35329 862 aa17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Dnajc2P54103 621 aaKnown RBP17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Esyt1Q3U7R1 1092 aaKnown RBP17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Ubash3aQ3V3E1 624 aa17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Unc93aQ710D3 458 aa17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Pdzph1Q8BGR1 1238 aa17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Mknk2Q8CDB0 459 aa17.92■□□□□ 0.46
Ldb3-208ENSMUST00000228044 Myl6bQ8CI43 207 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 72.8 ms