RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Ddx42Q810A7 929 aaKnown RBP10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Slfnl1Q8BHW9 410 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 PawrQ925B0 333 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Amotl1Q9D4H4 968 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gm6133B2RY53 190 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Zfp277E9Q6D6 583 aaKnown RBP10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ccdc129Q14B48 1034 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ppfia2Q8BSS9 1257 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Dmtf1Q8CE22 761 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Mettl5Q8K1A0 209 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Sil1Q9EPK6 465 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Sfmbt1Q9JMD1 863 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Magea2Q9R2A2 320 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ccdc112A0AUP1 442 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ptcd3Q14C51 685 aaKnown RBP10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ndel1Q9ERR1 345 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Casq1O09165 405 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Tnfaip3Q60769 775 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ptpdc1Q6NZK8 747 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Snx6Q6P8X1 406 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Hook2Q7TMK6 716 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Arl6ip6Q8BH07 226 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Cfap36Q8C6E0 343 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Mrfap1Q9CQL7 125 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Raver1Q9CW46 748 aaKnown RBP10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ccdc91Q9D8L5 442 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Lrriq3Q14DL3 633 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ano10Q8BH79 659 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 YarsQ91WQ3 528 aaKnown RBP10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Rcan3Q9JKK0 239 aa10.07□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Atp5iQ06185 71 aaKnown RBP10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Kif3bQ61771 747 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Krt32Q62168 407 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Bicd1Q8BR07 835 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Zcchc8Q9CYA6 709 aaKnown RBP10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Bcl2l12Q9D3J3 255 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Clec2iQ9WVF9 217 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Tex13aA2AFS9 377 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 SparcP07214 302 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ect2Q07139 913 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ccdc159Q8C963 411 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Trbv21A0A0A6YX06 97 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Cdc27A2A6Q5 825 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Foxred2Q3USW5 665 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Spire2Q8K1S6 718 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Bloc1s4Q8VED2 215 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Erlin1Q91X78 346 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gm5624F6ZZG8 207 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Paxbp1P58501 919 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Hdhd2Q3UGR5 259 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Mapk3Q63844 380 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 PigsQ6PD26 555 aaKnown RBP10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Phf21aQ6ZPK0 659 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Pum3Q8BKS9 647 aaKnown RBP10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 CrbnQ8C7D2 445 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Rab3il1Q8VDV3 383 aa10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ddx24Q9ESV0 857 aaKnown RBP10.06□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Irx1P81068 480 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gas2l3Q3UWW6 683 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Fkbp5Q64378 456 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Pdzrn3Q69ZS0 1063 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Jazf1Q80ZQ5 243 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Jakmip1Q8BVL9 626 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Mrps25Q9D125 171 aaKnown RBP10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gm4985A2ALC6 410 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Lonrf1D3YY23 762 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Tuft1O08970 390 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 ZfaP23607 742 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Cnnm4Q69ZF7 771 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Cavin2Q63918 418 aaKnown RBP10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Terf2ipQ91VL8 393 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Q922M7 232 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gm16430A6X8J1 155 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Samd15F6XZJ7 620 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Kcnj6P48542 425 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 AgerQ62151 402 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Znf579Q80VM4 562 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Cadps2Q8BYR5 1297 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Bag4Q8CI61 457 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Rlbp1Q9Z275 317 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Diaph1O08808 1255 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Adam19O35674 920 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Chrm1P12657 460 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Mdm2P23804 489 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Dnm1P39053 867 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ttf2Q5NC05 1138 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Scnn1aQ61180 699 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Smarca1Q6PGB8 1046 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Nup93Q8BJ71 819 aaKnown RBP10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Slc5a1Q8C3K6 665 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Q8C4P0 716 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Rad51cQ924H5 366 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Hsf2bpQ9D4G2 338 aa10.05□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Acbd3Q8BMP6 525 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Prpf31Q8CCF0 499 aaKnown RBP10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Trpd52l3Q9CQ14 231 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ttc7bE9Q6P5 843 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Mroh9G5E8L9 891 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Tuba1cP68373 449 aaKnown RBP10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Zc4h2Q68FG0 224 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 79.6 ms