Protein–RNA interactions for Protein: Q3USW5

Foxred2, FAD-dependent oxidoreductase domain-containing protein 2, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxred2Q3USW5 Gm25239-201ENSMUST00000174915 86 ntBASIC37.46■■■■□ 3.59
Foxred2Q3USW5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Foxred2Q3USW5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Foxred2Q3USW5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Foxred2Q3USW5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Foxred2Q3USW5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
Foxred2Q3USW5 Gm15042-201ENSMUST00000120212 883 ntBASIC33.18■■■□□ 2.9
Foxred2Q3USW5 Gm15045-201ENSMUST00000117359 883 ntBASIC32.5■■■□□ 2.79
Foxred2Q3USW5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Foxred2Q3USW5 Gm24109-201ENSMUST00000175489 103 ntBASIC32.23■■■□□ 2.75
Foxred2Q3USW5 Psd-208ENSMUST00000224556 2034 ntBASIC32.15■■■□□ 2.74
Foxred2Q3USW5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Foxred2Q3USW5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.75■■■□□ 2.67
Foxred2Q3USW5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Foxred2Q3USW5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Foxred2Q3USW5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Foxred2Q3USW5 Gm23366-201ENSMUST00000175022 89 ntBASIC31.35■■■□□ 2.61
Foxred2Q3USW5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Foxred2Q3USW5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Foxred2Q3USW5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Foxred2Q3USW5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Foxred2Q3USW5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Foxred2Q3USW5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Foxred2Q3USW5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Foxred2Q3USW5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
Foxred2Q3USW5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Foxred2Q3USW5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Foxred2Q3USW5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.88■■■□□ 2.53
Foxred2Q3USW5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Foxred2Q3USW5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Foxred2Q3USW5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Foxred2Q3USW5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.55■■■□□ 2.48
Foxred2Q3USW5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Foxred2Q3USW5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.5■■■□□ 2.47
Foxred2Q3USW5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Foxred2Q3USW5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Foxred2Q3USW5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Foxred2Q3USW5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Foxred2Q3USW5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Foxred2Q3USW5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Foxred2Q3USW5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.98■■■□□ 2.39
Foxred2Q3USW5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.84■■■□□ 2.37
Foxred2Q3USW5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Foxred2Q3USW5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.73■■■□□ 2.35
Foxred2Q3USW5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Foxred2Q3USW5 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.63■■■□□ 2.33
Foxred2Q3USW5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Foxred2Q3USW5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Foxred2Q3USW5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Foxred2Q3USW5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Foxred2Q3USW5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.52■■■□□ 2.32
Foxred2Q3USW5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Foxred2Q3USW5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Foxred2Q3USW5 Gm25238-201ENSMUST00000174914 89 ntBASIC29.41■■■□□ 2.3
Foxred2Q3USW5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Foxred2Q3USW5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.34■■■□□ 2.29
Foxred2Q3USW5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Foxred2Q3USW5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Foxred2Q3USW5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Foxred2Q3USW5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Foxred2Q3USW5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Foxred2Q3USW5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Foxred2Q3USW5 Gm27325-201ENSMUST00000175467 74 ntBASIC29.14■■■□□ 2.26
Foxred2Q3USW5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.1■■■□□ 2.25
Foxred2Q3USW5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Foxred2Q3USW5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.08■■■□□ 2.25
Foxred2Q3USW5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.08■■■□□ 2.25
Foxred2Q3USW5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Foxred2Q3USW5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Foxred2Q3USW5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29■■■□□ 2.23
Foxred2Q3USW5 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.97■■■□□ 2.23
Foxred2Q3USW5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Foxred2Q3USW5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
Foxred2Q3USW5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Foxred2Q3USW5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Foxred2Q3USW5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Foxred2Q3USW5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Foxred2Q3USW5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.74■■■□□ 2.19
Foxred2Q3USW5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Foxred2Q3USW5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.62■■■□□ 2.17
Foxred2Q3USW5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Foxred2Q3USW5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.55■■■□□ 2.16
Foxred2Q3USW5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Foxred2Q3USW5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Foxred2Q3USW5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.49■■■□□ 2.15
Foxred2Q3USW5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Foxred2Q3USW5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Foxred2Q3USW5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
Foxred2Q3USW5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Foxred2Q3USW5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Foxred2Q3USW5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Foxred2Q3USW5 Rab21-202ENSMUST00000218831 843 ntBASIC28.33■■■□□ 2.13
Foxred2Q3USW5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Foxred2Q3USW5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Foxred2Q3USW5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
Foxred2Q3USW5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Foxred2Q3USW5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Foxred2Q3USW5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Foxred2Q3USW5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Foxred2Q3USW5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.2■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms