RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PRELID3BQ9Y3B1 194 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 FAT3Q8TDW7 4589 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 CCDC144AA2RUR9 1427 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 SVEP1Q4LDE5 3571 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 DMXL1Q9Y485 3027 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 POLEQ07864 2286 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 FLG2Q5D862 2391 aaPredicted RBP1.04□□□□□ -2.24
SMAD4-207ENST00000589076 PDE6DO43924 150 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 OR2B3O76000 313 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 ZNF682O95780 498 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 CRYGAP11844 174 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 SPI1P17947 270 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 YPEL3P61236 119 aaPredicted RBP1.03□□□□□ -2.24
SMAD4-207ENST00000589076 FADDQ13158 208 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 SPA17Q15506 151 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 AKIRIN2Q53H80 203 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.03□□□□□ -2.24
SMAD4-207ENST00000589076 PHF13Q86YI8 300 aaPredicted RBP1.03□□□□□ -2.24
SMAD4-207ENST00000589076 C12orf45Q8N5I9 185 aaPredicted RBP1.03□□□□□ -2.24
SMAD4-207ENST00000589076 C15orf53Q8NAA6 179 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 OR5A1Q8NGJ0 315 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 OR51A2Q8NGJ7 313 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 AQP3Q92482 292 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 C2orf50Q96LR7 162 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 PRAP1Q96NZ9 151 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 TRABDQ9H4I3 376 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 IDI2-AS1Q9NZ38 188 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 ZFYVE9O95405 1425 aa1.03□□□□□ -2.24
SMAD4-207ENST00000589076 MYH10P35580 1976 aa1.03□□□□□ -2.25
SMAD4-207ENST00000589076 hCG_1818297A0A087WSY0 165 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 A8MT66 165 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 PCF11O94913 1555 aaKnown RBP1.02□□□□□ -2.25
SMAD4-207ENST00000589076 SERPINE1P05121 402 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 CTXN2P0C2S0 81 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 MIFP14174 115 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 PPIBP23284 216 aaKnown RBP1.02□□□□□ -2.25
SMAD4-207ENST00000589076 AP3S2P59780 193 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 LINC01554Q52M75 96 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 CAMSAP1Q5T5Y3 1602 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.02□□□□□ -2.254e-10■■■■■ 37.9
SMAD4-207ENST00000589076 CSMD2Q7Z408 3487 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 WDFY3Q8IZQ1 3526 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 OR52L1Q8NGH7 329 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 DIDO1Q9BTC0 2240 aaKnown RBP1.02□□□□□ -2.25
SMAD4-207ENST00000589076 OSTCQ9NRP0 149 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 C14orf105Q9NVL8 296 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 TAS2R4Q9NYW5 299 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 FBXO5Q9UKT4 447 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 CYSLTR1Q9Y271 337 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 CDH23Q9H251 3354 aa1.02□□□□□ -2.25
SMAD4-207ENST00000589076 CICQ96RK0 1608 aaPredicted RBP1.01□□□□□ -2.25
SMAD4-207ENST00000589076 J3QRK9 145 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 C8GP07360 202 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 ASAH2BP0C7U1 165 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 BAALC-AS2P0C853 105 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 CASP1P29466 404 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 BRS3P32247 399 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 ANP32AP39687 249 aaKnown RBP1.01□□□□□ -2.25
SMAD4-207ENST00000589076 ERVS71-1P61550 626 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 TEX36Q5VZQ5 186 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 BTF3L4Q96K17 158 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 RNF122Q9H9V4 155 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 NHP2Q9NX24 153 aaKnown RBP1.01□□□□□ -2.25
SMAD4-207ENST00000589076 EPDR1Q9UM22 224 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 SNURFQ9Y675 71 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 SMG1Q96Q15 3661 aaKnown RBP1.01□□□□□ -2.25
SMAD4-207ENST00000589076 MYO15AQ9UKN7 3530 aa1.01□□□□□ -2.25
SMAD4-207ENST00000589076 TNRC6AQ8NDV7 1962 aaKnown RBP1.01□□□□□ -2.25
SMAD4-207ENST00000589076 SCN3AQ9NY46 2000 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 A0A087X0T9 212 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 TRAV1-1A0A0B4J248 108 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 OR2T1O43869 369 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 OR1I1O60431 355 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 PLCXD2Q0VAA5 305 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 LIN52Q52LA3 116 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 LINC00311Q8N616 119 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 GPR146Q96CH1 333 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 KIFC1Q9BW19 673 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 NMNAT1Q9HAN9 279 aaPredicted RBP1□□□□□ -2.25
SMAD4-207ENST00000589076 UQCC1Q9NVA1 299 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 ROS1P08922 2347 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 ARHGEF28Q8N1W1 1705 aaKnown RBP1□□□□□ -2.25
SMAD4-207ENST00000589076 KMT2AQ03164 3969 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 TECTAO75443 2155 aa1□□□□□ -2.25
SMAD4-207ENST00000589076 IGKV2D-26A0A0A0MRZ7 120 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 C7orf71A4D174 169 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 C2orf70A6NJV1 201 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 TMEM210A6NLX4 147 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 OR7C1O76099 320 aaPredicted RBP0.99□□□□□ -2.25
SMAD4-207ENST00000589076 OR4E1P0C645 316 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 RHOGP84095 191 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 REEP5Q00765 189 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 PDE6HQ13956 83 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 OR52R1Q8NGF1 315 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 SIGMAR1Q99720 223 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 RNASE7Q9H1E1 156 aaKnown RBP0.99□□□□□ -2.25
SMAD4-207ENST00000589076 TVP23BQ9NYZ1 205 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 HS3ST2Q9Y278 367 aa0.99□□□□□ -2.25
SMAD4-207ENST00000589076 A0A087WX48 190 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 GEMIN2O14893 280 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms