RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 IGHV4-4A0A075B6R2 117 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 F6UB75 175 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 SLC25A6P12236 298 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 S100A5P33763 92 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 AP3S2P59780 193 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 SLC35E1Q96K37 410 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 TRGV9Q99603 122 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 SLC25A21Q9BQT8 299 aaPredicted RBP7.85□□□□□ -1.15
RNF4-212ENST00000509258 XCL2Q9UBD3 114 aa7.85□□□□□ -1.15
RNF4-212ENST00000509258 PAIP2BQ9ULR5 123 aaKnown RBP7.85□□□□□ -1.15
RNF4-212ENST00000509258 FAT2Q9NYQ8 4349 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 DNAH2Q9P225 4427 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 TEX48A0A1B0GUV7 120 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 TMEM189A5PLL7 270 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 PMS2P5A8MQ11 134 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 SYNGR2O43760 224 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 NDUFB6O95139 128 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 FABP1P07148 127 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 P0DMU3 169 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 FAM231AP0DMU4 169 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 FAM231CP0DMU5 169 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 HLA-DRB4P13762 266 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 ANXA7P20073 488 aaKnown RBP7.84□□□□□ -1.15
RNF4-212ENST00000509258 ID1P41134 155 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 ATP5IP56385 69 aaPredicted RBP7.84□□□□□ -1.15
RNF4-212ENST00000509258 UBE2MP61081 183 aaKnown RBP7.84□□□□□ -1.15
RNF4-212ENST00000509258 Q6ZTC4 211 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 TMED3Q9Y3Q3 217 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 HLA-DRB4X5D2U9 266 aa7.84□□□□□ -1.15
RNF4-212ENST00000509258 NACAE9PAV3 2078 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 DNAH17Q9UFH2 4485 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 DEFB131BA0A096LNP1 70 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 ZNF701M0R085 212 aaPredicted RBP7.83□□□□□ -1.16
RNF4-212ENST00000509258 AMBPP02760 352 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 PRB4P10163 310 aaPredicted RBP7.83□□□□□ -1.16
RNF4-212ENST00000509258 NKX2-1P43699 371 aaPredicted RBP7.83□□□□□ -1.16
RNF4-212ENST00000509258 PAX9P55771 341 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 POLR2GP62487 172 aaKnown RBP eCLIP7.83□□□□□ -1.16
RNF4-212ENST00000509258 ID3Q02535 119 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 SPANXN5Q5MJ07 72 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 SAMD13Q5VXD3 122 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 OR8G2PQ6IF36 304 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 ACOT7LQ6ZUV0 252 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 ZNF709Q8N972 641 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 OR4D5Q8NGN0 318 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 NDUFAF3Q9BU61 184 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 SLC25A32Q9H2D1 315 aa7.83□□□□□ -1.16
RNF4-212ENST00000509258 SMIM9A6NGZ8 99 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 PLA2G10O15496 165 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 S100A7P31151 101 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 RAB11AP62491 216 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 C12orf74Q32Q52 190 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 SPANXN2Q5MJ10 180 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 IGFL4Q6B9Z1 124 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 COQ8AQ8NI60 647 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 DEDD2Q8WXF8 326 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 LINC00052Q96N35 136 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 NEU1Q99519 415 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 SLC35B3Q9H1N7 401 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 SAV1Q9H4B6 383 aaPredicted RBP7.82□□□□□ -1.16
RNF4-212ENST00000509258 PKHD1P08F94 4074 aa7.82□□□□□ -1.16
RNF4-212ENST00000509258 TRAV8-2A0A0B4J237 113 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 MED6O75586 246 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 OR4E1P0C645 316 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 SPART-AS1P0CW21 52 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 IL7P13232 177 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 ARL16Q0P5N6 197 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 ZNF705AQ6ZN79 300 aaPredicted RBP7.81□□□□□ -1.16
RNF4-212ENST00000509258 PPP1R14BQ96C90 147 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 FAM210BQ96KR6 192 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 PLA2G2EQ9NZK7 142 aa7.81□□□□□ -1.16
RNF4-212ENST00000509258 RCL1Q9Y2P8 373 aaKnown RBP7.81□□□□□ -1.16
RNF4-212ENST00000509258 ZNF98A6NK75 572 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 ZNF705FA8MVS1 300 aaPredicted RBP7.8□□□□□ -1.16
RNF4-212ENST00000509258 SNRPGP15A8MWD9 76 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 SSSCA1O60232 199 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 CFDP00746 253 aaPredicted RBP7.8□□□□□ -1.16
RNF4-212ENST00000509258 PRM2P04554 102 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 ZNF705DP0CH99 300 aaPredicted RBP7.8□□□□□ -1.16
RNF4-212ENST00000509258 ZNF705BP0CI00 300 aaPredicted RBP7.8□□□□□ -1.16
RNF4-212ENST00000509258 MED14OSP0DP75 135 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 PSMB3P49720 205 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 C1orf194Q5T5A4 169 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 TRIQKQ629K1 86 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 AMTNQ6UX39 209 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 FOXI2Q6ZQN5 318 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 POM121L12Q8N7R1 296 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 CIB3Q96Q77 187 aaPredicted RBP7.8□□□□□ -1.16
RNF4-212ENST00000509258 SLC25A22Q9H936 323 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 DOK5Q9P104 306 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 GOLT1BQ9Y3E0 138 aa7.8□□□□□ -1.16
RNF4-212ENST00000509258 STRAPQ9Y3F4 350 aaKnown RBP7.8□□□□□ -1.16
RNF4-212ENST00000509258 A0A0J9YX75 114 aa7.79□□□□□ -1.16
RNF4-212ENST00000509258 A0A1B0GVY2 172 aa7.79□□□□□ -1.16
RNF4-212ENST00000509258 NAP1L6A6NFF2 107 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms