RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 COMMD5Q9GZQ3 224 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 PARVGQ9HBI0 331 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 PRTFDC1Q9NRG1 225 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 CISHQ9NSE2 258 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 BAIAP2Q9UQB8 552 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 TRPM7Q96QT4 1865 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 BRWD1Q9NSI6 2320 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 ACANP16112 2415 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 MYOM2P54296 1465 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 MLH3Q9UHC1 1453 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 ADAMTS12P58397 1594 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 HSPG2P98160 4391 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 CACNA1EQ15878 2313 aa0.65□□□□□ -2.3
ITGB1-216ENST00000493758 CSPG4Q6UVK1 2322 aa0.65□□□□□ -2.3
ITGB1-216ENST00000493758 DNAH9Q9NYC9 4486 aa0.65□□□□□ -2.3
ITGB1-216ENST00000493758 ABCC3O15438 1527 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 PKD1P98161 4303 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 LAMC1P11047 1609 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 MROH1Q8NDA8 1641 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 DYNC1H1Q14204 4646 aaKnown RBP0.65□□□□□ -2.31
ITGB1-216ENST00000493758 TIAM2Q8IVF5 1701 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 NWD2Q9ULI1 1742 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 TGIF2-C20orf24A0A0A6YYL0 155 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 FUOMA2VDF0 154 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HLA-DRB1P01911 266 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 PMP2P02689 132 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 IFNA16P05015 189 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H2BOP23527 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H2BBP33778 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 ZNF80P51504 273 aaPredicted RBP0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H2BDP58876 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 SNRPD2P62316 118 aaKnown RBP0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H2BCP62807 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 SUPT4H1P63272 117 aaKnown RBP0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HBA1P69905 142 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 RUNX1Q01196 453 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 PLCXD2Q0VAA5 305 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 ZNF345Q14585 488 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 CDK5R1Q15078 307 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST2H2BEQ16778 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 SPANXN3Q5MJ09 141 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.65□□□□□ -2.31
ITGB1-216ENST00000493758 SYPL2Q5VXT5 272 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 LPCAT3Q6P1A2 487 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 ALKAL1Q6UXT8 129 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 C1orf158Q8N1D5 194 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 LRRC25Q8N386 305 aaPredicted RBP0.65□□□□□ -2.31
ITGB1-216ENST00000493758 LINC00471Q8N535 108 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 ANKRD29Q8N6D5 301 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 OR2T4Q8NH00 348 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 RASSF5Q8WWW0 418 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 KLK6Q92876 244 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H2BHQ93079 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 DCUN1D1Q96GG9 259 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 SERPINI1Q99574 410 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H2BNQ99877 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H2BMQ99879 126 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 GINS4Q9BRT9 223 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 DERL1Q9BUN8 251 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 ULBP3Q9BZM4 244 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 YIPF3Q9GZM5 350 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 CMTM6Q9NX76 183 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 VPS29Q9UBQ0 182 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 ARFGEF1Q9Y6D6 1849 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 NEO1Q92859 1461 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 RALGAPA2Q2PPJ7 1873 aa0.65□□□□□ -2.31
ITGB1-216ENST00000493758 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
ITGB1-216ENST00000493758 SOGA1O94964 1423 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 AGLP35573 1532 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 UGGT2Q9NYU1 1516 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 ABCA9Q8IUA7 1624 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 ABCA6Q8N139 1617 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 TJP1Q07157 1748 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 TRAV9-1A0A075B6T8 112 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 GOLGA6L19H0YKK7 550 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 OR5F1O95221 314 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 IFNA10P01566 189 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 HIST1H1TP22492 207 aaPredicted RBP0.64□□□□□ -2.31
ITGB1-216ENST00000493758 OMPP47874 163 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 UBE2IP63279 158 aaKnown RBP0.64□□□□□ -2.31
ITGB1-216ENST00000493758 ITGB3BPQ13352 177 aaPredicted RBP0.64□□□□□ -2.31
ITGB1-216ENST00000493758 CDK10Q15131 360 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 KCNJ8Q15842 424 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 IMPG1Q17R60 797 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 SPOPLQ6IQ16 392 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 BPIFA4PQ86YQ2 179 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 TRAPPC5Q8IUR0 188 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 TMEM86BQ8N661 226 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 OR13C4Q8NGS5 318 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 DNAJC9Q8WXX5 260 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 CCDC42Q96M95 316 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 SCGB3A1Q96QR1 104 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 FBXL12Q9NXK8 326 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 OR5AC2Q9NZP5 309 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 CKLFQ9UBR5 152 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 LHFPL6Q9Y693 200 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 KIF24Q5T7B8 1368 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 TONSLQ96HA7 1378 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 ARHGAP35Q9NRY4 1499 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 SAMD9Q5K651 1589 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms