RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 TTC37Q6PGP7 1564 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 ODAMA1E959 279 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 J3QRE1 110 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 NDUFB3O43676 98 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 C1QCP02747 245 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 CXCL1P09341 107 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 DYNLT3P51808 116 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 TMBIM6P55061 237 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 DYNLT1P63172 113 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 BRMS1LQ5PSV4 323 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 SOSTDC1Q6X4U4 206 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 IFT20Q8IY31 132 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 C3orf56Q8N813 242 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 ST6GALNAC3Q8NDV1 305 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 SLC30A7Q8NEW0 376 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 OR2T10Q8NGZ9 312 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 SPACA4Q8TDM5 124 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 SKA2Q8WVK7 121 aaPredicted RBP2.11□□□□□ -2.07
USP25-206ENST00000453553 TEX37Q96LM6 180 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 TXNDC17Q9BRA2 123 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 NPCDR1Q9BY65 106 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 BCL2L10Q9HD36 194 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 C8orf4Q9NR00 106 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 NUBP2Q9Y5Y2 271 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 SZT2Q5T011 3432 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 LRRC7Q96NW7 1537 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 DCAF1Q9Y4B6 1507 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 KIAA2026Q5HYC2 2103 aa2.11□□□□□ -2.07
USP25-206ENST00000453553 MSMO1Q15800 293 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 C1orf140Q5VVS0 124 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 EIF5AL1Q6IS14 154 aaKnown RBP2.1□□□□□ -2.07
USP25-206ENST00000453553 TOMM20LQ6UXN7 152 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 C7orf65Q6ZTY9 151 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 LINC00471Q8N535 108 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 C12orf29Q8N999 325 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 THEM6Q8WUY1 208 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 YIPF3Q9GZM5 350 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 CST9LQ9H4G1 147 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 LRTM1Q9HBL6 345 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 POPDC3Q9HBV1 291 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 NHP2Q9NX24 153 aaKnown RBP2.1□□□□□ -2.07
USP25-206ENST00000453553 TAS2R4Q9NYW5 299 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 ASB4Q9Y574 426 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 LHFPL6Q9Y693 200 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 UNC79Q9P2D8 2635 aa2.1□□□□□ -2.07
USP25-206ENST00000453553 SETD5Q9C0A6 1442 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 GREB1Q4ZG55 1949 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 PLXND1Q9Y4D7 1925 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 CFTRP13569 1480 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 CDK12Q9NYV4 1490 aaPredicted RBP2.09□□□□□ -2.07
USP25-206ENST00000453553 CUX1P39880 1505 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 TRAV3A0A0B4J244 114 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 FUOMA2VDF0 154 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 MGST1P10620 155 aaKnown RBP2.09□□□□□ -2.07
USP25-206ENST00000453553 PLCXD2Q0VAA5 305 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 ZNF826PQ6ZT77 177 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 OR4D11Q8NGI4 311 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 ISOC1Q96CN7 298 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 BORCS8Q96FH0 119 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 SLC25A21Q9BQT8 299 aaPredicted RBP2.09□□□□□ -2.07
USP25-206ENST00000453553 ADAT1Q9BUB4 502 aaKnown RBP2.09□□□□□ -2.07
USP25-206ENST00000453553 OTORQ9NRC9 128 aa2.09□□□□□ -2.07
USP25-206ENST00000453553 XIRP1Q702N8 1843 aaKnown RBP2.09□□□□□ -2.08
USP25-206ENST00000453553 EPRSP07814 1512 aaKnown RBP2.08□□□□□ -2.08
USP25-206ENST00000453553 TRAV1-1A0A0B4J248 108 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 GADD45GO95257 159 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 HLA-EP13747 358 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 RPL7P18124 248 aaKnown RBP2.08□□□□□ -2.08
USP25-206ENST00000453553 ARPP19P56211 112 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 MYL5Q02045 173 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 RNASE10Q5GAN6 216 aaKnown RBP2.08□□□□□ -2.08
USP25-206ENST00000453553 OR9Q1Q8NGQ5 310 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 ZNF418Q8TF45 676 aaPredicted RBP2.08□□□□□ -2.08
USP25-206ENST00000453553 ZCCHC13Q8WW36 166 aaKnown RBP2.08□□□□□ -2.08
USP25-206ENST00000453553 ZC2HC1AQ96GY0 325 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 CCDC115Q96NT0 180 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 SLC50A1Q9BRV3 221 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 LAMTOR2Q9Y2Q5 125 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 RNF11Q9Y3C5 154 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 WDR97A6NE52 1622 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 MYH11P35749 1972 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 PKD1L2Q7Z442 2459 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 STRCP1A6NGW2 1772 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 MYO9BQ13459 2157 aa2.08□□□□□ -2.08
USP25-206ENST00000453553 HEATR5AQ86XA9 2040 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 C3P01024 1663 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 TRDV1A0A1B0GX56 115 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 H7BYZ3 331 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 TIMM17BO60830 172 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 S100A11P31949 105 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 ZNF846Q147U1 533 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 ESRGQ1W209 222 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 SPANXN5Q5MJ07 72 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 HRCT1Q6UXD1 115 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 ANGPTL5Q86XS5 388 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 TMEM35BQ8NCS4 154 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 RNASE11Q8TAA1 199 aaKnown RBP2.07□□□□□ -2.08
USP25-206ENST00000453553 ZNF714Q96N38 554 aa2.07□□□□□ -2.08
USP25-206ENST00000453553 C6orf62Q9GZU0 229 aaPredicted RBP2.07□□□□□ -2.08
USP25-206ENST00000453553 NAT8BQ9UHF3 227 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms