RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 Q6ZS49 121 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 MBD3L1Q8WWY6 194 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 SRD5A1P18405 259 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 LYPD1Q8N2G4 141 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 MGST2Q99735 147 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 LY6G6FQ5SQ64 297 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 WDR83OSQ9Y284 106 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 FBLN7Q53RD9 439 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 SSC4DQ8WTU2 575 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 LINC00587B1AMM8 73 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 CTAG1AP78358 180 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 SLC25A2Q9BXI2 301 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 TMEM242Q9NWH2 141 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 PCNX1Q96RV3 2341 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 PSG1P11464 419 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 PHLDA1Q8WV24 401 aaPredicted RBP13.01□□□□□ -0.33
PTPN13-204ENST00000436978 Q6P435 159 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 ERVK11-1P61568 191 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 KLHL30-AS1Q8NEE0 82 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 GGTLC1Q9BX51 225 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 LHFPL1Q86WI0 220 aa13.01□□□□□ -0.33
PTPN13-204ENST00000436978 TRAV1-1A0A0B4J248 108 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 A0A1B0GW64 132 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 ZNF138P52744 262 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 CKS1BP61024 79 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 RPL15P61313 204 aaKnown RBP13□□□□□ -0.33
PTPN13-204ENST00000436978 EML6Q6ZMW3 1958 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 CHCHD5Q9BSY4 110 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 SMPXQ9UHP9 88 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 PMS2P5A8MQ11 134 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 LDLRAD4O15165 306 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 SUPT4H1P63272 117 aaKnown RBP13□□□□□ -0.33
PTPN13-204ENST00000436978 MORN3Q6PF18 240 aaPredicted RBP13□□□□□ -0.33
PTPN13-204ENST00000436978 MESP1Q9BRJ9 268 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 IGKCP01834 107 aa13□□□□□ -0.33
PTPN13-204ENST00000436978 FAM19A2Q8N3H0 131 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 SIGLEC9Q9Y336 463 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 A0A087WV48 116 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 PSPNO60542 156 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 TYMSP04818 313 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 C14orf144Q96I85 54 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 EP300Q09472 2414 aaPredicted RBP12.99□□□□□ -0.33
PTPN13-204ENST00000436978 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
PTPN13-204ENST00000436978 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
PTPN13-204ENST00000436978 FOXL2NBQ6ZUU3 175 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 LINC00518Q8N0U6 118 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 IGKV1D-8A0A087WSZ0 117 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 EVI2AP22794 236 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 CACNA1BQ00975 2339 aa12.99□□□□□ -0.33
PTPN13-204ENST00000436978 SERF1AO75920 110 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 SSBP4Q9BWG4 385 aaPredicted RBP12.98□□□□□ -0.33
PTPN13-204ENST00000436978 ITGB1BP1O14713 200 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 OR2K2Q8NGT1 345 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 IGFL3Q6UXB1 125 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 NRN1Q9NPD7 142 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 PRDM13Q9H4Q3 707 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 ZNF106Q9H2Y7 1883 aaKnown RBP12.98□□□□□ -0.33
PTPN13-204ENST00000436978 TNFSF13O75888 250 aa12.98□□□□□ -0.33
PTPN13-204ENST00000436978 APOMO95445 188 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 SCRT1Q9BWW7 348 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 C1QTNF9P0C862 333 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 PSG3Q16557 428 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 OR5A1Q8NGJ0 315 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 SAA4P35542 130 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 OCC1Q8TAD7 63 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 WFDC1Q9HC57 220 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 IGKV1D-17A0A075B6S4 117 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 FOXG1P55316 489 aaPredicted RBP12.97□□□□□ -0.33
PTPN13-204ENST00000436978 ZNF474Q6S9Z5 364 aaPredicted RBP12.97□□□□□ -0.33
PTPN13-204ENST00000436978 CADP27708 2225 aa12.97□□□□□ -0.33
PTPN13-204ENST00000436978 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.33
PTPN13-204ENST00000436978 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.33
PTPN13-204ENST00000436978 DAZ1Q9NQZ3 744 aaKnown RBP12.96□□□□□ -0.33
PTPN13-204ENST00000436978 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 NMSQ5H8A3 153 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 LINC00469Q8N7U9 141 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 A6NNC1 897 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 SEC11AP67812 179 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 LCNL1Q6ZST4 164 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 NIT1Q86X76 327 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 BPESC1Q9GZL8 116 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 PCNX2A6NKB5 2137 aa12.96□□□□□ -0.33
PTPN13-204ENST00000436978 MSMBP08118 114 aa12.96□□□□□ -0.34
PTPN13-204ENST00000436978 PDE6HQ13956 83 aa12.96□□□□□ -0.34
PTPN13-204ENST00000436978 BRD3OSQ6XYD6 125 aa12.96□□□□□ -0.34
PTPN13-204ENST00000436978 E7EQL1 145 aa12.96□□□□□ -0.34
PTPN13-204ENST00000436978 PAX2Q02962 417 aa12.96□□□□□ -0.34
PTPN13-204ENST00000436978 A0A087WX48 190 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 FGF16O43320 207 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
PTPN13-204ENST00000436978 EXOC3-AS1Q8N2X6 119 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 SELLP14151 372 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 TMEM238C9JI98 176 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 UBE2E1P51965 193 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms