RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 FAM106CPP0CH98 169 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 SAA1P0DJI8 122 aaPredicted RBP8.46□□□□□ -1.06
SCAF4-203ENST00000434667 PPIFP30405 207 aaKnown RBP8.46□□□□□ -1.06
SCAF4-203ENST00000434667 FAM106AQ4KMX7 169 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 FAM120AOSQ5T036 256 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 WDR31Q8NA23 367 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 TPSG1Q9NRR2 321 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.46□□□□□ -1.06
SCAF4-203ENST00000434667 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 SLC25A17O43808 307 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 NCR2O95944 276 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 TOMM40O96008 361 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 ITLN1Q8WWA0 313 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 TXNDC17Q9BRA2 123 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 GAL3ST2Q9H3Q3 398 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 UFC1Q9Y3C8 167 aa8.46□□□□□ -1.06
SCAF4-203ENST00000434667 FAM208BQ5VWN6 2430 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 IGHV1-69-2A0A0G2JMI3 117 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 A0A1W2PRE2 83 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 HLA-DRB1P01911 266 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 BPIFB3P59826 476 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 C9orf106Q8NAJ2 232 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 OR1N2Q8NGR9 330 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 RITA1Q96K30 269 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 GUCD1Q96NT3 240 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 ZPBPQ9BS86 351 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 NOTCH2Q04721 2471 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 PEX7O00628 323 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 ORM1P02763 201 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 CDKN1BP46527 198 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 CSN1S1P47710 185 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 RPL11P62913 178 aaKnown RBP8.45□□□□□ -1.06
SCAF4-203ENST00000434667 PSG9Q00887 426 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 MBNL2Q5VZF2 373 aaKnown RBP8.45□□□□□ -1.06
SCAF4-203ENST00000434667 MRPL52Q86TS9 123 aaKnown RBP8.45□□□□□ -1.06
SCAF4-203ENST00000434667 ZNF329Q86UD4 541 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 CIARTQ8N365 385 aaPredicted RBP8.45□□□□□ -1.06
SCAF4-203ENST00000434667 FAM169BQ8N8A8 192 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 PERPQ96FX8 193 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 MRPS16Q9Y3D3 137 aaKnown RBP8.45□□□□□ -1.06
SCAF4-203ENST00000434667 SPCS1Q9Y6A9 102 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 CUL9Q8IWT3 2517 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 TRAV9-1A0A075B6T8 112 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 C21orf140B9A014 251 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 CCL3L1P16619 93 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 BVES-AS1Q5T3Y7 98 aa8.45□□□□□ -1.06
SCAF4-203ENST00000434667 RNASE2P10153 161 aaKnown RBP8.44□□□□□ -1.06
SCAF4-203ENST00000434667 GPR183P32249 361 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 SRSF8Q9BRL6 282 aaKnown RBP8.44□□□□□ -1.06
SCAF4-203ENST00000434667 AP5S1Q9NUS5 200 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 IGHV1-18A0A0C4DH31 117 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 LINC00305Q7Z4B0 112 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 RPRMLQ8N4K4 120 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 SPRY4Q9C004 299 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 DYNLRB1Q9NP97 96 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 JPT1Q9UK76 154 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 A8MWL6 223 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 TNFSF15O95150 251 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 SCGB1C2P0DMR2 95 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
SCAF4-203ENST00000434667 MRPL20Q9BYC9 149 aaKnown RBP8.44□□□□□ -1.06
SCAF4-203ENST00000434667 IGHV3-49A0A0A0MS15 119 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 SYS1-DBNDD2H3BUS1 97 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 C22orf34Q6ZV56 151 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 TDHQ8IZJ6 230 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 FOXA2Q9Y261 457 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-203ENST00000434667 FAM231BA6NCW3 169 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 MGST3O14880 152 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 ACP1P24666 158 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 KIR2DL2P43627 348 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-203ENST00000434667 WT1-ASQ06250 92 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 CLEC2AQ6UVW9 174 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 NHP2Q9NX24 153 aaKnown RBP8.43□□□□□ -1.06
SCAF4-203ENST00000434667 PEF1Q9UBV8 284 aaKnown RBP8.43□□□□□ -1.06
SCAF4-203ENST00000434667 ZFHX3Q15911 3703 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 A6NDN8 102 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 FABP2P12104 132 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 SUB1P53999 127 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCAF4-203ENST00000434667 CACNG7P62955 275 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 LOXL1Q08397 574 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-203ENST00000434667 ADTRPQ96IZ2 230 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 LY96Q9Y6Y9 160 aa8.43□□□□□ -1.06
SCAF4-203ENST00000434667 TRGV8A0A0C4DH27 118 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 K7EP13 123 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 CLEC3BP05452 202 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 EXOC3-AS1Q8N2X6 119 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 SRRM5B3KS81 715 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 UPK2O00526 184 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 IGHV3-23P01764 117 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 TIMM23BQ5SRD1 257 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 ZNF788Q6ZQV5 615 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 SLC25A10Q9UBX3 287 aaPredicted RBP8.42□□□□□ -1.06
SCAF4-203ENST00000434667 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 PRCDQ00LT1 54 aa8.42□□□□□ -1.06
SCAF4-203ENST00000434667 CD69Q07108 199 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms