RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 RPH3ALQ9UNE2 315 aa13.21□□□□□ -0.3
CMTM3-202ENST00000424011 PRSS47A8MTI9 375 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 NBR2O15453 112 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 IGHV4-39P01824 125 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 CRISP2P16562 243 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 HOXB4P17483 251 aaPredicted RBP13.2□□□□□ -0.3
CMTM3-202ENST00000424011 S100A7P31151 101 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 LMO4P61968 165 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 OCIAD2Q56VL3 154 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 LHFPL4Q7Z7J7 247 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
CMTM3-202ENST00000424011 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
CMTM3-202ENST00000424011 TOX4O94842 621 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 HINT1P49773 126 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-202ENST00000424011 NPBQ8NG41 125 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 OR5T1Q8NG75 326 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 CST9LQ9H4G1 147 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 TBL2Q9Y4P3 447 aaKnown RBP13.19□□□□□ -0.3
CMTM3-202ENST00000424011 RNF114Q9Y508 228 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 KRTDAPP60985 99 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 SRSF12Q8WXF0 261 aaKnown RBP13.19□□□□□ -0.3
CMTM3-202ENST00000424011 ZNF586Q9NXT0 402 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 CHD6Q8TD26 2715 aa13.19□□□□□ -0.3
CMTM3-202ENST00000424011 REG1AP05451 166 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 SIGLECL1Q8N7X8 197 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 FNDC4Q9H6D8 234 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-202ENST00000424011 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 SCO2A0A1W2PP80 73 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 NDUFS8O00217 210 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 NDUFA3O95167 84 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 UBE2E1P51965 193 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 SSBP2P81877 361 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-202ENST00000424011 KLHDC1Q8N7A1 406 aa13.18□□□□□ -0.3
CMTM3-202ENST00000424011 PGPEP1LA6NFU8 196 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 TEX22C9J3V5 150 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 CNIH1O95406 144 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 AREGP15514 252 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 TSPOP30536 169 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 TAS2R45P59539 299 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 RHOGP84095 191 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 Q0VG73 95 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 HES1Q14469 280 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 BAGE3Q86Y29 109 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 BAGE2Q86Y30 109 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 SGMS2Q8NHU3 365 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 NPIPB3Q92617 1050 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 EAF1Q96JC9 268 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-202ENST00000424011 TECRQ9NZ01 308 aaKnown RBP13.17□□□□□ -0.3
CMTM3-202ENST00000424011 F11RQ9Y624 299 aaKnown RBP13.17□□□□□ -0.3
CMTM3-202ENST00000424011 TRAV34A0A0B4J273 112 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 FAM168AQ92567 244 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 FAM208BQ5VWN6 2430 aa13.17□□□□□ -0.3
CMTM3-202ENST00000424011 TRBV20OR9-2A0A075B6H5 130 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 A0A1W2PRD5 423 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 A0A1W2PRF3 423 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 A0A1W2PRM7 423 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 TCRBV4S1A1TA0A5B7 111 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 GPX1P07203 203 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 CRYGCP07315 174 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 MRPL32Q9BYC8 188 aaKnown RBP13.16□□□□□ -0.3
CMTM3-202ENST00000424011 OR1L4Q8NGR5 311 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 ARL2-SNX15V9GYD0 113 aa13.16□□□□□ -0.3
CMTM3-202ENST00000424011 A1L4Q6 167 aa13.15□□□□□ -0.3
CMTM3-202ENST00000424011 FCN1O00602 326 aa13.15□□□□□ -0.3
CMTM3-202ENST00000424011 VAMP3Q15836 100 aa13.15□□□□□ -0.3
CMTM3-202ENST00000424011 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
CMTM3-202ENST00000424011 FAM103A1Q9BTL3 118 aaKnown RBP13.15□□□□□ -0.3
CMTM3-202ENST00000424011 TMEM167BQ9NRX6 74 aa13.15□□□□□ -0.3
CMTM3-202ENST00000424011 F2Z2F3 143 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 ZNF253O75346 499 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 EBI3Q14213 229 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 TMEM116Q8NCL8 245 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 MRPL18Q9H0U6 180 aaKnown RBP13.14□□□□□ -0.31
CMTM3-202ENST00000424011 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
CMTM3-202ENST00000424011 COX6B1P14854 86 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 CBLN1P23435 193 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 SLC25A33Q9BSK2 321 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 NRN1Q9NPD7 142 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 MRPL27Q9P0M9 148 aaKnown RBP13.14□□□□□ -0.31
CMTM3-202ENST00000424011 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 AKAP6Q13023 2319 aa13.14□□□□□ -0.31
CMTM3-202ENST00000424011 FAM106CPP0CH98 169 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 SFRP2Q96HF1 295 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 TRGV9Q99603 122 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 IGKV1D-37A0A075B6S9 117 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 PSMB11A5LHX3 300 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 C8orf88P0DMB2 117 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 APELAP0DMC3 54 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 MFAP2P55001 183 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 FXYD3Q14802 87 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 C19orf35Q6ZS72 473 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 C10orf105Q8TEF2 133 aa13.13□□□□□ -0.31
CMTM3-202ENST00000424011 COX7A2P2O60397 106 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms