RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 Q8IYB0 196 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 GDPD1Q8N9F7 314 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 CT55Q8WUE5 264 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 SLAMF6Q96DU3 332 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 GPER1Q99527 375 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 KRTAP2-4Q9BYR9 128 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 KRTAP2-1Q9BYU5 128 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 FBXO5Q9UKT4 447 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 CASP8AP2Q9UKL3 1982 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 ROBO3Q96MS0 1386 aa0.06□□□□□ -2.4
SCARNA4-201ENST00000629045 E9PCH4 1651 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 NEO1Q92859 1461 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 PEAK1Q9H792 1746 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 FRAS1Q86XX4 4008 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 hCG_1818297A0A087WSY0 165 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 IGLV3-32A0A0A0MS00 114 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 CLDN24A6NM45 220 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 A8MT66 165 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 J3QRK9 145 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 CYB5BO43169 146 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 CNIH1O95406 144 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 SERPINE1P05121 402 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 SERPINA6P08185 405 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 SMIM17P0DL12 118 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 PPIBP23284 216 aaKnown RBP0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 SPINK7P58062 85 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 DYNLT1P63172 113 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 EIF5AP63241 154 aaKnown RBP0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 HAGHLQ6PII5 290 aaPredicted RBP0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 C2orf82Q6UX34 121 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 OR6V1Q8N148 313 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 EXOC3-AS1Q8N2X6 119 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 C12orf45Q8N5I9 185 aaPredicted RBP0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 CLDN22Q8N7P3 220 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 SLC30A7Q8NEW0 376 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 FAM172AQ8WUF8 416 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 BORCS7Q96B45 105 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 LINC00052Q96N35 136 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 TP53RKQ96S44 253 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 CMSS1Q9BQ75 279 aaKnown RBP0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 PRADC1Q9BSG0 188 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 PSTPIP2Q9H939 334 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 KMT2DO14686 5537 aa0.05□□□□□ -2.4
SCARNA4-201ENST00000629045 SNAPC4Q5SXM2 1469 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 MED1Q15648 1581 aaPredicted RBP0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 hADV38S2A0JD32 116 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 TIMM17BO60830 172 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 SRP14P37108 136 aaKnown RBP0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 IAH1Q2TAA2 248 aaPredicted RBP0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 C12orf74Q32Q52 190 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 Q6Q795 121 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 OR52L1Q8NGH7 329 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 SLC25A40Q8TBP6 338 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 PSMF1Q92530 271 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 RNASE7Q9H1E1 156 aaKnown RBP0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 TVP23BQ9NYZ1 205 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 IDI2-AS1Q9NZ38 188 aa0.04□□□□□ -2.4
SCARNA4-201ENST00000629045 SYNE2Q8WXH0 6885 aaKnown RBP0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 MCM3APO60318 1980 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 A0A087WUJ7 227 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 SMIM23A6NLE4 172 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 K7EIL1 84 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 CD2P06729 351 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 C8GP07360 202 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 HOXA6P31267 233 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 IMPG1Q17R60 797 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 GRINAQ7Z429 371 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 TEN1Q86WV5 123 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 TSKUQ8WUA8 353 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 LINC00467Q9BRT7 94 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 TMEM133Q9H2Q1 129 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 RNF122Q9H9V4 155 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 UQCC1Q9NVA1 299 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 MED29Q9NX70 200 aa0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 NOSIPQ9Y314 301 aaKnown RBP0.03□□□□□ -2.4
SCARNA4-201ENST00000629045 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
SCARNA4-201ENST00000629045 KCPQ6ZWJ8 1503 aa0.03□□□□□ -2.41
SCARNA4-201ENST00000629045 HECW2Q9P2P5 1572 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 TNCP24821 2201 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 FSIP2Q5CZC0 6907 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 TRAV10A0A0B4J240 114 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 SMIM9A6NGZ8 99 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 F8W1H4 67 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 H3BRM9 83 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 KDELR1P24390 212 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 SRIP30626 198 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 RNASE4P34096 147 aaKnown RBP0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 OMPP47874 163 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 DEFA3P59666 94 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 LYRM7Q5U5X0 104 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 C4orf22Q6V702 233 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 ZNF833PQ6ZTB9 187 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 PDZD9Q8IXQ8 264 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 CANT1Q8WVQ1 401 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 CCDC42Q96M95 316 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 LYSMD1Q96S90 227 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 TMEM138Q9NPI0 162 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 PCTPQ9UKL6 214 aa0.02□□□□□ -2.41
SCARNA4-201ENST00000629045 LY96Q9Y6Y9 160 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms