RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 AP3S2P59780 193 aa12.59□□□□□ -0.39
LITAF-211ENST00000572255 SIGLEC15Q6ZMC9 328 aa12.59□□□□□ -0.39
LITAF-211ENST00000572255 OR51G1Q8NGK1 321 aa12.59□□□□□ -0.39
LITAF-211ENST00000572255 NRN1Q9NPD7 142 aa12.59□□□□□ -0.39
LITAF-211ENST00000572255 V9GYH0 126 aa12.59□□□□□ -0.39
LITAF-211ENST00000572255 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
LITAF-211ENST00000572255 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 GPX4P36969 197 aaPredicted RBP12.58□□□□□ -0.4
LITAF-211ENST00000572255 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
LITAF-211ENST00000572255 RBMY1FQ15415 496 aaKnown RBP12.58□□□□□ -0.4
LITAF-211ENST00000572255 TMEM128Q5BJH2 165 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 LGALS9CQ6DKI2 356 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 TOMM5Q8N4H5 51 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 RNF125Q96EQ8 232 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 SLC35E1Q96K37 410 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 PBDC1Q9BVG4 233 aa12.58□□□□□ -0.4
LITAF-211ENST00000572255 ZFP92A6NM28 416 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 ZNF705EA8MWA4 302 aaPredicted RBP12.57□□□□□ -0.4
LITAF-211ENST00000572255 PITX3O75364 302 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 MIFP14174 115 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 GAMTQ14353 236 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 RPP25LQ8N5L8 163 aaKnown RBP12.57□□□□□ -0.4
LITAF-211ENST00000572255 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 C2CD4CQ8TF44 421 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
LITAF-211ENST00000572255 CLEC5AQ9NY25 188 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 X6R8D5 127 aa12.57□□□□□ -0.4
LITAF-211ENST00000572255 IGKV1D-37A0A075B6S9 117 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 IAPPP10997 89 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 VAMP1P23763 118 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
LITAF-211ENST00000572255 ZNF90Q03938 601 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 ZNF79Q15937 498 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 OR8G2PQ6IF36 304 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 LRTM2Q8N967 370 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 HRH4Q9H3N8 390 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 TBC1D24Q9ULP9 559 aa12.56□□□□□ -0.4
LITAF-211ENST00000572255 KMT2AQ03164 3969 aa12.55□□□□□ -0.4
LITAF-211ENST00000572255 DEDDO75618 318 aa12.55□□□□□ -0.4
LITAF-211ENST00000572255 SLC25A21Q9BQT8 299 aaPredicted RBP12.55□□□□□ -0.4
LITAF-211ENST00000572255 PFDN2Q9UHV9 154 aa12.55□□□□□ -0.4
LITAF-211ENST00000572255 CCDC160A6NGH7 325 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 H3BMM0 161 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 FABP1P07148 127 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 SLC25A6P12236 298 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 S100A5P33763 92 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 LYZP61626 148 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 RAB11AP62491 216 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 DEDD2Q8WXF8 326 aa12.54□□□□□ -0.4
LITAF-211ENST00000572255 ELOA3CA0A087WX78 387 aaPredicted RBP12.53□□□□□ -0.4
LITAF-211ENST00000572255 C11orf94C9JXX5 98 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 SFT2D2O95562 160 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 HLA-DMBP28068 263 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 TCTAP57738 103 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 NUTF2P61970 127 aaKnown RBP12.53□□□□□ -0.4
LITAF-211ENST00000572255 PPP1R1AQ13522 171 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 OR2F1Q13607 317 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 TRGV9Q99603 122 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 C1QTNF4Q9BXJ3 329 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
LITAF-211ENST00000572255 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
LITAF-211ENST00000572255 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.4
LITAF-211ENST00000572255 SNRPGP15A8MWD9 76 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 IGLL5B9A064 214 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 MED6O75586 246 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 HLA-DRB4P13762 266 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 NKX2-1P43699 371 aaPredicted RBP12.52□□□□□ -0.41
LITAF-211ENST00000572255 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.41
LITAF-211ENST00000572255 MAGT1Q9H0U3 335 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 XCL2Q9UBD3 114 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 HLA-DRB4X5D2U9 266 aa12.52□□□□□ -0.41
LITAF-211ENST00000572255 VPS13DQ5THJ4 4388 aa12.51□□□□□ -0.41
LITAF-211ENST00000572255 IGKV1OR2-108A0A075B7D4 117 aa12.51□□□□□ -0.41
LITAF-211ENST00000572255 HOXB5P09067 269 aa12.51□□□□□ -0.41
LITAF-211ENST00000572255 C1orf194Q5T5A4 169 aa12.51□□□□□ -0.41
LITAF-211ENST00000572255 Q6ZTC4 211 aa12.51□□□□□ -0.41
LITAF-211ENST00000572255 THAP8Q8NA92 274 aa12.51□□□□□ -0.41
LITAF-211ENST00000572255 CIB3Q96Q77 187 aaPredicted RBP12.51□□□□□ -0.41
LITAF-211ENST00000572255 APLNQ9ULZ1 77 aa12.51□□□□□ -0.41
LITAF-211ENST00000572255 TRAV10A0A0B4J240 114 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 WRBO00258 174 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 SYNGR2O43760 224 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 ID1P41134 155 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 PSMB3P49720 205 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 DEFB1P60022 68 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 RPP30P78346 268 aaKnown RBP12.5□□□□□ -0.41
LITAF-211ENST00000572255 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 PPP1R14BQ96C90 147 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 LINC00052Q96N35 136 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
LITAF-211ENST00000572255 CELA1Q9UNI1 258 aa12.5□□□□□ -0.41
LITAF-211ENST00000572255 PRSS46E5RG02 174 aa12.49□□□□□ -0.41
LITAF-211ENST00000572255 SOCS3O14543 225 aa12.49□□□□□ -0.41
LITAF-211ENST00000572255 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
LITAF-211ENST00000572255 PRR20EP86478 221 aa12.49□□□□□ -0.41
LITAF-211ENST00000572255 PRR20CP86479 221 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms