RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 WDR83OSQ9Y284 106 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 UBE2L5PA0A1B0GUS4 154 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 CLN5O75503 358 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 RPLP1P05386 114 aaKnown RBP10.01□□□□□ -0.81
SPG7-209ENST00000564047 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 RND2P52198 227 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 RAB2AP61019 212 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 FAM209BQ5JX69 171 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 LCNL1Q6ZST4 164 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 ZNF491Q8N8L2 437 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 THAP8Q8NA92 274 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 ZNF502Q8TBZ5 544 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 SCGB1C1Q8TD33 95 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 NPIPB3Q92617 1050 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 UBE2E2Q96LR5 201 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 WDR61Q9GZS3 305 aaKnown RBP10.01□□□□□ -0.81
SPG7-209ENST00000564047 GAR1Q9NY12 217 aaKnown RBP10.01□□□□□ -0.81
SPG7-209ENST00000564047 TIMM9Q9Y5J7 89 aa10.01□□□□□ -0.81
SPG7-209ENST00000564047 TRAV30A0A087WSZ9 112 aa10□□□□□ -0.81
SPG7-209ENST00000564047 F8W735 103 aaPredicted RBP10□□□□□ -0.81
SPG7-209ENST00000564047 TSPAN4O14817 238 aa10□□□□□ -0.81
SPG7-209ENST00000564047 AGPAT2O15120 278 aa10□□□□□ -0.81
SPG7-209ENST00000564047 MPDU1O75352 247 aa10□□□□□ -0.81
SPG7-209ENST00000564047 SERF2P84101 59 aa10□□□□□ -0.81
SPG7-209ENST00000564047 Q56UQ5 140 aa10□□□□□ -0.81
SPG7-209ENST00000564047 TCTEX1D4Q5JR98 221 aa10□□□□□ -0.81
SPG7-209ENST00000564047 ZNF343Q6P1L6 599 aa10□□□□□ -0.81
SPG7-209ENST00000564047 TEPPQ6URK8 271 aa10□□□□□ -0.81
SPG7-209ENST00000564047 C3orf56Q8N813 242 aa10□□□□□ -0.81
SPG7-209ENST00000564047 CLRN3Q8NCR9 226 aa10□□□□□ -0.81
SPG7-209ENST00000564047 WFDC12Q8WWY7 111 aa10□□□□□ -0.81
SPG7-209ENST00000564047 LSM4Q9Y4Z0 139 aaKnown RBP10□□□□□ -0.81
SPG7-209ENST00000564047 S4R3C0 116 aa10□□□□□ -0.81
SPG7-209ENST00000564047 FAM74A7A6NL05 159 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 GNG7O60262 68 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 SCGB2A1O75556 95 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 IGHV3-23P01764 117 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 FGF7P21781 194 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 CDX1P47902 265 aaPredicted RBP9.99□□□□□ -0.81
SPG7-209ENST00000564047 RAB31Q13636 194 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 FAM74A3Q4VXF1 159 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 SPSB3Q6PJ21 355 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 CCDC140Q96MF4 163 aa9.99□□□□□ -0.81
SPG7-209ENST00000564047 IGKV1D-37A0A075B6S9 117 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 IGKV1OR2-108A0A075B7D4 117 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.98□□□□□ -0.81
SPG7-209ENST00000564047 ZFP92A6NM28 416 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 C9JQL5 133 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 IGHV3-11P01762 117 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 CLEC3BP05452 202 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 IGLC1P0CG04 106 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 OR10J1P30954 320 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 FHITP49789 147 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 CLEC19AQ6UXS0 136 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 MBD3L1Q8WWY6 194 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 TRGV9Q99603 122 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 EIF5A2Q9GZV4 153 aaKnown RBP9.98□□□□□ -0.81
SPG7-209ENST00000564047 SLC35B3Q9H1N7 401 aa9.98□□□□□ -0.81
SPG7-209ENST00000564047 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
SPG7-209ENST00000564047 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 RBFOX3A6NFN3 312 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 NUPL2O15504 423 aaKnown RBP9.97□□□□□ -0.81
SPG7-209ENST00000564047 TGOLN2O43493 480 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 CTSGP08311 255 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 LGALS1P09382 135 aaKnown RBP9.97□□□□□ -0.81
SPG7-209ENST00000564047 CD28P10747 220 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 GPR183P32249 361 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 PPT1P50897 306 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 RUNX1Q01196 453 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 ZNF506Q5JVG8 444 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 MGST2Q99735 147 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 NPCDR1Q9BY65 106 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 GNB4Q9HAV0 340 aa9.97□□□□□ -0.81
SPG7-209ENST00000564047 PEF1Q9UBV8 284 aaKnown RBP9.97□□□□□ -0.81
SPG7-209ENST00000564047 C17orf112F2Z3M2 114 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 NDUFS6O75380 124 aaKnown RBP9.96□□□□□ -0.82
SPG7-209ENST00000564047 IGKV1-17P01599 117 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 HSPB1P04792 205 aaKnown RBP9.96□□□□□ -0.82
SPG7-209ENST00000564047 FABP1P07148 127 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 ATF4P18848 351 aaPredicted RBP9.96□□□□□ -0.82
SPG7-209ENST00000564047 RPL29P47914 159 aaKnown RBP9.96□□□□□ -0.82
SPG7-209ENST00000564047 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.82
SPG7-209ENST00000564047 SELENOTP62341 195 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 PMS2P11Q13670 270 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 TIGITQ495A1 244 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 CYP2G1PQ6ZSU1 146 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 OR10G4Q8NGN3 311 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 C4orf3Q8WVX3 66 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 GGTLC1Q9BX51 225 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 KCNIP2Q9NS61 270 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.82
SPG7-209ENST00000564047 TSSC4Q9Y5U2 329 aaPredicted RBP9.96□□□□□ -0.82
SPG7-209ENST00000564047 MBP02144 154 aa9.95□□□□□ -0.82
SPG7-209ENST00000564047 ADMP35318 185 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms