RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZNF705DP0CH99 300 aaPredicted RBP7.46□□□□□ -1.22
LINC00838-201ENST00000562956 ZNF705BP0CI00 300 aaPredicted RBP7.46□□□□□ -1.22
LINC00838-201ENST00000562956 TFPI2P48307 235 aa7.46□□□□□ -1.22
LINC00838-201ENST00000562956 ADIRFQ15847 76 aa7.46□□□□□ -1.22
LINC00838-201ENST00000562956 ETFRF1Q6IPR1 90 aa7.46□□□□□ -1.22
LINC00838-201ENST00000562956 THAP8Q8NA92 274 aa7.46□□□□□ -1.22
LINC00838-201ENST00000562956 WNT10AQ9GZT5 417 aa7.46□□□□□ -1.22
LINC00838-201ENST00000562956 FUT9Q9Y231 359 aa7.46□□□□□ -1.22
LINC00838-201ENST00000562956 TCRBV4S1A1TA0A5B7 111 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 PSMB11A5LHX3 300 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 C11orf94C9JXX5 98 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 DLEU1O43261 78 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 FAM106CPP0CH98 169 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 CX3CL1P78423 397 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 NDPQ00604 133 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 SRSF8Q9BRL6 282 aaKnown RBP7.45□□□□□ -1.22
LINC00838-201ENST00000562956 FAM208BQ5VWN6 2430 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 A0A087WWC5 75 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 A0A1W2PPQ1 181 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 TCF21O43680 179 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 PAX1P15863 534 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 GCHFRP30047 84 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 ATP5G3P48201 142 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 CST9LP1Q5W188 147 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 ZNF562Q6V9R5 426 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 TMEM116Q8NCL8 245 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 PPP1R14DQ9NXH3 145 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 WNK2Q9Y3S1 2297 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 TMEM250H0YL14 139 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 I3L2K1 104 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 CORTO00230 105 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 TGOLN2O43493 480 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 OR5G3P0C626 314 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 NPPCP23582 126 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 ASPHD1Q5U4P2 390 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 MORN5Q5VZ52 161 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 OR51G1Q8NGK1 321 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 RPUSD4Q96CM3 377 aaKnown RBP7.45□□□□□ -1.22
LINC00838-201ENST00000562956 GSX1Q9H4S2 264 aaPredicted RBP7.45□□□□□ -1.22
LINC00838-201ENST00000562956 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
LINC00838-201ENST00000562956 MAP1AP78559 2803 aaPredicted RBP7.44□□□□□ -1.22
LINC00838-201ENST00000562956 ABCA2Q9BZC7 2435 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 CELSR1Q9NYQ6 3014 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 KRTAP10-9P60411 292 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 KLF17Q5JT82 389 aaPredicted RBP7.44□□□□□ -1.22
LINC00838-201ENST00000562956 BRD3OSQ6XYD6 125 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 Q8N9W7 124 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 ARPC1AQ92747 370 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 ZNF503Q96F45 646 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 TNFRSF19Q9NS68 423 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 YTHDF2Q9Y5A9 579 aaKnown RBP7.44□□□□□ -1.22
LINC00838-201ENST00000562956 TRAV40A0A0B4J280 105 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 MSMBP08118 114 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 BRS3P32247 399 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 PATE2Q6UY27 113 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 C19orf24Q9BVV8 132 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 PARLQ9H300 379 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 DNAJC4Q9NNZ3 241 aa7.44□□□□□ -1.22
LINC00838-201ENST00000562956 TRAV5A0A0B4J249 113 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 IGHV1-69DA0A0B4J2H0 117 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 IGHV1-69P01742 117 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 OR5I1Q13606 314 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 C22orf15Q8WYQ4 148 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 UHRF2Q96PU4 802 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 TRGV9Q99603 122 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 TECRQ9NZ01 308 aaKnown RBP7.43□□□□□ -1.22
LINC00838-201ENST00000562956 IGHV7-81A0A0B4J1V7 117 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 K7EIM0 57 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 RPLP1P05386 114 aaKnown RBP7.43□□□□□ -1.22
LINC00838-201ENST00000562956 IGHV4-38-2P0DP08 117 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 EGR2P11161 476 aaPredicted RBP7.43□□□□□ -1.22
LINC00838-201ENST00000562956 DSCR9P59020 149 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 SELENOTP62341 195 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 TDRG1Q3Y452 100 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 C16orf82Q7Z2V1 217 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 HSPB9Q9BQS6 159 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 SDF2L1Q9HCN8 221 aa7.43□□□□□ -1.22
LINC00838-201ENST00000562956 AURKAIP1Q9NWT8 199 aaPredicted RBP7.43□□□□□ -1.22
LINC00838-201ENST00000562956 PDE6DO43924 150 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 COX7A2P2O60397 106 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 OR7C2O60412 319 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 FAM167A-AS1Q96KT0 104 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 SOX21Q9Y651 276 aaPredicted RBP7.42□□□□□ -1.22
LINC00838-201ENST00000562956 CENPEQ02224 2701 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 PPP5D1E7EU14 171 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 OR10J4P0C629 311 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 C8orf88P0DMB2 117 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 RAB4AP20338 218 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 ERVFC1-1P60608 527 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 C10orf113Q5VZT2 155 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 FANCD2OSQ96PS1 177 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 DERL1Q9BUN8 251 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 C7orf69Q9H7B7 122 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 HIF1ANQ9NWT6 349 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 C1RLQ9NZP8 487 aa7.42□□□□□ -1.22
LINC00838-201ENST00000562956 A0A0U1RQK1 487 aa7.41□□□□□ -1.22
LINC00838-201ENST00000562956 NPIPB5A8MRT5 1133 aa7.41□□□□□ -1.22
LINC00838-201ENST00000562956 NDUFB4O95168 129 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms