RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 OR1S1Q8NH92 325 aa11.84□□□□□ -0.51
DDX55-212ENST00000544738 DCANP1Q8TF63 244 aa11.84□□□□□ -0.51
DDX55-212ENST00000544738 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
DDX55-212ENST00000544738 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
DDX55-212ENST00000544738 PRR13Q9NZ81 148 aa11.84□□□□□ -0.51
DDX55-212ENST00000544738 TOMM40O96008 361 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 IFNA4P05014 189 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 SPP1P10451 314 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 S100A5P33763 92 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 DHRS2Q13268 280 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 KLF9Q13886 244 aaPredicted RBP11.83□□□□□ -0.52
DDX55-212ENST00000544738 MORN3Q6PF18 240 aaPredicted RBP11.83□□□□□ -0.52
DDX55-212ENST00000544738 C16orf54Q6UWD8 224 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 RBKSQ9H477 322 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 PFDN2Q9UHV9 154 aa11.83□□□□□ -0.52
DDX55-212ENST00000544738 ZNF688P0C7X2 276 aa11.82□□□□□ -0.52
DDX55-212ENST00000544738 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
DDX55-212ENST00000544738 NUP62P37198 522 aaPredicted RBP11.82□□□□□ -0.52
DDX55-212ENST00000544738 TMED4Q7Z7H5 227 aa11.82□□□□□ -0.52
DDX55-212ENST00000544738 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
DDX55-212ENST00000544738 C11orf45Q8TAV5 145 aa11.82□□□□□ -0.52
DDX55-212ENST00000544738 GLMPQ8WWB7 406 aa11.82□□□□□ -0.52
DDX55-212ENST00000544738 TRIM63Q969Q1 353 aa11.82□□□□□ -0.52
DDX55-212ENST00000544738 SLC25A21Q9BQT8 299 aaPredicted RBP11.82□□□□□ -0.52
DDX55-212ENST00000544738 CCDC160A6NGH7 325 aa11.81□□□□□ -0.52
DDX55-212ENST00000544738 PSG1P11464 419 aa11.81□□□□□ -0.52
DDX55-212ENST00000544738 SLC25A6P12236 298 aa11.81□□□□□ -0.52
DDX55-212ENST00000544738 SNRPD3P62318 126 aaKnown RBP11.81□□□□□ -0.52
DDX55-212ENST00000544738 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
DDX55-212ENST00000544738 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
DDX55-212ENST00000544738 OR51G1Q8NGK1 321 aa11.81□□□□□ -0.52
DDX55-212ENST00000544738 SEPSECSQ9HD40 501 aaKnown RBP11.81□□□□□ -0.52
DDX55-212ENST00000544738 V9GYH0 126 aa11.81□□□□□ -0.52
DDX55-212ENST00000544738 BUB3O43684 328 aa11.8□□□□□ -0.52
DDX55-212ENST00000544738 FABP1P07148 127 aa11.8□□□□□ -0.52
DDX55-212ENST00000544738 VAMP1P23763 118 aa11.8□□□□□ -0.52
DDX55-212ENST00000544738 LRTM2Q8N967 370 aa11.8□□□□□ -0.52
DDX55-212ENST00000544738 SLC35E1Q96K37 410 aa11.8□□□□□ -0.52
DDX55-212ENST00000544738 NRN1Q9NPD7 142 aa11.8□□□□□ -0.52
DDX55-212ENST00000544738 A0A1B0GVY2 172 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 ZFP92A6NM28 416 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 FAM90A26D6RGX4 464 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 PITX3O75364 302 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 MED6O75586 246 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 RAB11AP62491 216 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 ZNF79Q15937 498 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 PSMG4Q5JS54 123 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 OR8G2PQ6IF36 304 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 SIGLEC15Q6ZMC9 328 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 RNF125Q96EQ8 232 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
DDX55-212ENST00000544738 KNCNA6PVL3 124 aa11.78□□□□□ -0.52
DDX55-212ENST00000544738 NUTF2P61970 127 aaKnown RBP11.78□□□□□ -0.52
DDX55-212ENST00000544738 RPP30P78346 268 aaKnown RBP11.78□□□□□ -0.52
DDX55-212ENST00000544738 GAMTQ14353 236 aa11.78□□□□□ -0.52
DDX55-212ENST00000544738 CCDC190Q86UF4 302 aa11.78□□□□□ -0.52
DDX55-212ENST00000544738 CIB3Q96Q77 187 aaPredicted RBP11.78□□□□□ -0.52
DDX55-212ENST00000544738 RAB40CQ96S21 281 aa11.78□□□□□ -0.52
DDX55-212ENST00000544738 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
DDX55-212ENST00000544738 TMED3Q9Y3Q3 217 aa11.78□□□□□ -0.52
DDX55-212ENST00000544738 SFT2D2O95562 160 aa11.77□□□□□ -0.53
DDX55-212ENST00000544738 GIG44P09565 113 aaPredicted RBP11.77□□□□□ -0.53
DDX55-212ENST00000544738 MIFP14174 115 aa11.77□□□□□ -0.53
DDX55-212ENST00000544738 NANOS2P60321 138 aaKnown RBP11.77□□□□□ -0.53
DDX55-212ENST00000544738 SPANXN2Q5MJ10 180 aa11.77□□□□□ -0.53
DDX55-212ENST00000544738 CENPSQ8N2Z9 138 aa11.77□□□□□ -0.53
DDX55-212ENST00000544738 PBDC1Q9BVG4 233 aa11.77□□□□□ -0.53
DDX55-212ENST00000544738 PKD1P98161 4303 aa11.77□□□□□ -0.53
DDX55-212ENST00000544738 SNRPGP15A8MWD9 76 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 ZNF701M0R085 212 aaPredicted RBP11.76□□□□□ -0.53
DDX55-212ENST00000544738 DEFB4AO15263 64 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 UBE2MP61081 183 aaKnown RBP11.76□□□□□ -0.53
DDX55-212ENST00000544738 C1orf194Q5T5A4 169 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 Q8NAQ8 132 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 C1QTNF4Q9BXJ3 329 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 HRH4Q9H3N8 390 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 HSPG2P98160 4391 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 HERC1Q15751 4861 aa11.76□□□□□ -0.53
DDX55-212ENST00000544738 ZNF705EA8MWA4 302 aaPredicted RBP11.75□□□□□ -0.53
DDX55-212ENST00000544738 SYNGR2O43760 224 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 IAPPP10997 89 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 TCTAP57738 103 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 ZNF90Q03938 601 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 PPP1R1AQ13522 171 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 TRGV9Q99603 122 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 PAIP2BQ9ULR5 123 aaKnown RBP11.75□□□□□ -0.53
DDX55-212ENST00000544738 AGRNO00468 2067 aa11.75□□□□□ -0.53
DDX55-212ENST00000544738 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 NAP1L6A6NFF2 107 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 PRSS29PA6NIE9 313 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 C11orf94C9JXX5 98 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 CFDP00746 253 aaPredicted RBP11.74□□□□□ -0.53
DDX55-212ENST00000544738 C4BPBP20851 252 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 ID1P41134 155 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 NKX2-1P43699 371 aaPredicted RBP11.74□□□□□ -0.53
DDX55-212ENST00000544738 INPP1P49441 399 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 RBM38Q9H0Z9 239 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms