RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 C10orf82Q8WW14 230 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 ACOT12Q8WYK0 555 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SMIM19Q96E16 107 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 PRRT1Q99946 306 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 NIPSNAP1Q9BPW8 284 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 DDA1Q9BW61 102 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 HRASLSQ9HDD0 168 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SMCO4Q9NRQ5 59 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 LYRM2Q9NU23 88 aaPredicted RBP1.21□□□□□ -2.22
LEMD3-205ENST00000544506 C14orf105Q9NVL8 296 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SPANXCQ9NY87 97 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 GSKIPQ9P0R6 139 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 OR52A1Q9UKL2 312 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 FBXO5Q9UKT4 447 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SLC22A13Q9Y226 551 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 ARL5AQ9Y689 179 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CITO14578 2027 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 PSME4Q14997 1843 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 HECW1Q76N89 1606 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 ABCC5O15440 1437 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CD109Q6YHK3 1445 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 FGD6Q6ZV73 1430 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SCN8AQ9UQD0 1980 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CUL9Q8IWT3 2517 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SYNJ1O43426 1573 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 RFX7Q2KHR2 1363 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 MYO5CQ9NQX4 1742 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 EFCAB6Q5THR3 1501 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 KIF20BQ96Q89 1820 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 KIF13AQ9H1H9 1805 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ATP7BP35670 1465 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RAPGEF2Q9Y4G8 1499 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 TOP2BQ02880 1626 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RNF17Q9BXT8 1623 aaKnown RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 PTPN23Q9H3S7 1636 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 A0A096LPI6 279 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 TGIF2-C20orf24A0A0A6YYL0 155 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 EXOC1LA0A1B0GW35 172 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 A0A1B0GW54 56 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 C9orf170A2RU37 121 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ARL5CA6NH57 179 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 CLDN24A6NM45 220 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 C5orf58C9J3I9 102 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 TRAPPC2LH3BP13 241 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 J3QR89 54 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 K7EP13 123 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 FAAHO00519 579 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 PLA2G10O15496 165 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 GADD45GO95257 159 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 PPBPP02775 128 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 MT-ND4LP03901 98 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 CSN2P05814 226 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 C8GP07360 202 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 CCL5P13501 91 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 HIST1H1BP16401 226 aaKnown RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 FGF7P21781 194 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RPL22P35268 128 aaKnown RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 CAPZBP47756 277 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 OR4D2P58180 307 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 UBE2G2P60604 165 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RPS20P60866 119 aaKnown RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RRAS2P62070 204 aaPredicted RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RPL30P62888 115 aaKnown RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 EMX2Q04743 252 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 FABP9Q0Z7S8 132 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 PEA15Q15121 130 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RHEBQ15382 184 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RSU1Q15404 277 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 TSNQ15631 228 aaKnown RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 DEFB115Q30KQ5 88 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 COL5A1-AS1Q5SY13 56 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 SBSNQ6UWP8 590 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 HIST2H3AQ71DI3 136 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ZNF720Q7Z2F6 126 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 GRINAQ7Z429 371 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 DEFB107AQ8IZN7 70 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 OR51D1Q8NGF3 324 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 EEF1AKMT1Q8WVE0 214 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 DNAJB3Q8WWF6 145 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 MBD3L1Q8WWY6 194 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 C14orf144Q96I85 54 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 GGACTQ9BVM4 153 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 DCSTAMPQ9H295 470 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 RASL12Q9NYN1 266 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 NAT8Q9UHE5 227 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 DKKL1Q9UK85 242 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ZNF609O15014 1411 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ZFYVE9O95405 1425 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ANKARQ7Z5J8 1434 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 PTPRSQ13332 1948 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 TIAM1Q13009 1591 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 LRRIQ1Q96JM4 1722 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 CCDC88AQ3V6T2 1871 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM2Q9UHN6 1383 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 BAZ2BQ9UIF8 2168 aaKnown RBP1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ASXL1Q8IXJ9 1541 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 DUOX2Q9NRD8 1548 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 E9PCH4 1651 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 GCC2Q8IWJ2 1684 aa1.2□□□□□ -2.22
LEMD3-205ENST00000544506 ADGRL2O95490 1459 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms