RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PRCDQ00LT1 54 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 ARL6IP6Q8N6S5 226 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 VSTM2AQ8TAG5 236 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 ZNF430Q9H8G1 570 aaPredicted RBP13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 MRGPRG-AS1Q2M3A8 158 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 VMA21Q3ZAQ7 101 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 COL5A1-AS1Q5SY13 56 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 OR10W1Q8NGF6 305 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 SSMEM1Q8WWF3 244 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 COMMD5Q9GZQ3 224 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 IL36BQ9NZH7 164 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 TRAV9-1A0A075B6T8 112 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 K7EN84 100 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 GCHFRP30047 84 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 LINC00310P59036 64 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 C10orf55Q5SWW7 151 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 C1orf159Q96HA4 380 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 PLEKHA3Q9HB20 300 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 DNAJC4Q9NNZ3 241 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 PLXNB1O43157 2135 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 SLC17A3O00476 420 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 CD24P25063 80 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 CEACAM3P40198 252 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 DYNAPQ8N1N2 210 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 OR5B3Q8NH48 314 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 OR4A5Q8NH83 315 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 MRPL18Q9H0U6 180 aaKnown RBP13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
PCDHB17P-201ENST00000539533 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 CSMD1Q96PZ7 3565 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 PLA2G2AP14555 144 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 SPATA31B1PQ5VZV4 182 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 SEPSECSQ9HD40 501 aaKnown RBP13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 NDUFA4L2Q9NRX3 87 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 SERF1AO75920 110 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 CA2P00918 260 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 ESDP10768 282 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 CRISP2P16562 243 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 PSG5Q15238 335 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 CFHR4Q92496 578 aa13.64□□□□□ -0.23
PCDHB17P-201ENST00000539533 ANKRD17O75179 2603 aaKnown RBP13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 CELSR1Q9NYQ6 3014 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 CGB1A6NKQ9 187 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 OR5AU1Q8NGC0 362 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 OR1L8Q8NGR8 309 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 C11orf52Q96A22 123 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 CRYGBP07316 175 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 NPY1RP25929 384 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 LGALS4P56470 323 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 RHOBP62745 196 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 STPG3Q8N7X2 389 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 TEX45Q8NA69 505 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 OR1L6Q8NGR2 347 aa13.63□□□□□ -0.23
PCDHB17P-201ENST00000539533 NBPF19A0A087WUL8 3843 aa13.62□□□□□ -0.23
PCDHB17P-201ENST00000539533 ABCA12Q86UK0 2595 aa13.62□□□□□ -0.23
PCDHB17P-201ENST00000539533 C9JCJ5 164 aa13.62□□□□□ -0.23
PCDHB17P-201ENST00000539533 FBLN7Q53RD9 439 aa13.62□□□□□ -0.23
PCDHB17P-201ENST00000539533 SIGLEC9Q9Y336 463 aa13.62□□□□□ -0.23
PCDHB17P-201ENST00000539533 MT-CO2P00403 227 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 TEPPQ6URK8 271 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 EAF1Q96JC9 268 aaPredicted RBP13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 UHRF2Q96PU4 802 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 SAMD10Q9BYL1 202 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 LY96Q9Y6Y9 160 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 FCN1O00602 326 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 COMPP49747 757 aaPredicted RBP13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 UBE2E1P51965 193 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 SLC35E1Q96K37 410 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 FBXL15Q9H469 300 aa13.61□□□□□ -0.23
PCDHB17P-201ENST00000539533 J3QKU1 62 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 IER3P46695 156 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 MMDQ15546 238 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 RPEL1Q2QD12 228 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 BAGE3Q86Y29 109 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 BAGE2Q86Y30 109 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 ZFHX3Q15911 3703 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 F2Z2F3 143 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 FRMD6-AS1P0C7T7 363 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 WT1-ASQ06250 92 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 PAX8Q06710 450 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 MINOS1Q5TGZ0 78 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 PPP1R27Q86WC6 154 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 MMD2Q8IY49 270 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 MINOS1-NBL1R4GNA1 71 aa13.6□□□□□ -0.23
PCDHB17P-201ENST00000539533 DOPEY2Q9Y3R5 2298 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 Q0VG73 95 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 RAB31Q13636 194 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 TNXAQ16473 311 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 AJUBAQ96IF1 538 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 V9GYV3 84 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 SNURFLB1AK76 121 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 RNASE2P10153 161 aaKnown RBP13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 AREGP15514 252 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 HES1Q14469 280 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms