RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 WFDC5Q8TCV5 224 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 PATE1Q8WXA2 126 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 ADAT3Q96EY9 351 aaPredicted RBP0.37□□□□□ -2.35
CCDC7-208ENST00000537047 BCL2L10Q9HD36 194 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 TMEM14CQ9P0S9 112 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 FBXO5Q9UKT4 447 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 PEAK1Q9H792 1746 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 NCOA1Q15788 1441 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 TRBV6-4A0A1B0GX49 114 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 C1orf196B1AJZ1 125 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 CYB5BO43169 146 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 SMIM17P0DL12 118 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 EIF5AP63241 154 aaKnown RBP0.36□□□□□ -2.35
CCDC7-208ENST00000537047 AESQ08117 197 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 RGS21Q2M5E4 152 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 TMEM97Q5BJF2 176 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 LYRM7Q5U5X0 104 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 LINC00322Q6ZN03 302 aaPredicted RBP0.36□□□□□ -2.35
CCDC7-208ENST00000537047 ST6GALNAC3Q8NDV1 305 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 SLC25A40Q8TBP6 338 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 GPER1Q99527 375 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 LINC00467Q9BRT7 94 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 PARD6GQ9BYG4 376 aaPredicted RBP0.36□□□□□ -2.35
CCDC7-208ENST00000537047 PARVGQ9HBI0 331 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 UQCC1Q9NVA1 299 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 C14orf105Q9NVL8 296 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 UBAP1Q9NZ09 502 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 PRELID3BQ9Y3B1 194 aa0.36□□□□□ -2.35
CCDC7-208ENST00000537047 ZNF106Q9H2Y7 1883 aaKnown RBP0.35□□□□□ -2.35
CCDC7-208ENST00000537047 HECW1Q76N89 1606 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 TCRBV4S1A1TA0A5B7 111 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 SMIM9A6NGZ8 99 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 NUPR1O60356 82 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 DNAL4O96015 105 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 RPS17P08708 135 aaKnown RBP0.35□□□□□ -2.35
CCDC7-208ENST00000537047 SRP14P37108 136 aaKnown RBP0.35□□□□□ -2.35
CCDC7-208ENST00000537047 EFNA4P52798 201 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 RANP62826 216 aaKnown RBP0.35□□□□□ -2.35
CCDC7-208ENST00000537047 C2orf82Q6UX34 121 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 SLC30A7Q8NEW0 376 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 OR8J2Q8NGG1 315 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 OR51A2Q8NGJ7 313 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 OR2T35Q8NGX2 323 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 SLAMF6Q96DU3 332 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 PRADC1Q9BSG0 188 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 RNASE7Q9H1E1 156 aaKnown RBP0.35□□□□□ -2.35
CCDC7-208ENST00000537047 TMEM133Q9H2Q1 129 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 GLTPQ9NZD2 209 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 CHCHD2Q9Y6H1 151 aaPredicted RBP0.35□□□□□ -2.35
CCDC7-208ENST00000537047 MCM3APO60318 1980 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 PLB1Q6P1J6 1458 aa0.35□□□□□ -2.35
CCDC7-208ENST00000537047 TRGV10A0A0A0MS01 117 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 IGHV1-58A0A0C4DH39 117 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 KDM6AO15550 1401 aaPredicted RBP0.34□□□□□ -2.36
CCDC7-208ENST00000537047 PIK3C2GO75747 1445 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 GADD45GO95257 159 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 LYPLA2O95372 231 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 DYNLT1P63172 113 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 TNS3Q68CZ2 1445 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 DOCK3Q8IZD9 2030 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 OTUD6BQ8N6M0 293 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 PLPP5Q8NEB5 264 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 MED12Q93074 2177 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 YPEL2Q96QA6 119 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 TP53RKQ96S44 253 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 SCN3AQ9NY46 2000 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 ORMDL1Q9P0S3 153 aa0.34□□□□□ -2.36
CCDC7-208ENST00000537047 ZFC3H1O60293 1989 aaKnown RBP0.34□□□□□ -2.36
CCDC7-208ENST00000537047 E9PCH4 1651 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 NAV2Q8IVL1 2488 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 IGLV3-32A0A0A0MS00 114 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 TLCD2A6NGC4 264 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 A8MWV9 139 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 HAND1O96004 215 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 TCRBP04435 133 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 LSM6P62312 80 aaKnown RBP0.33□□□□□ -2.36
CCDC7-208ENST00000537047 ITGB3BPQ13352 177 aaPredicted RBP0.33□□□□□ -2.36
CCDC7-208ENST00000537047 KRR1Q13601 381 aaKnown RBP0.33□□□□□ -2.36
CCDC7-208ENST00000537047 SPRNQ5BIV9 151 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 Q8IYB0 196 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 OR52L1Q8NGH7 329 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 PARVBQ9HBI1 364 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 IDI2-AS1Q9NZ38 188 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 APCP25054 2843 aa0.33□□□□□ -2.36
CCDC7-208ENST00000537047 COL1A1P02452 1464 aaPredicted RBP0.33□□□□□ -2.36
CCDC7-208ENST00000537047 PLXND1Q9Y4D7 1925 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 SNRNP200O75643 2136 aaKnown RBP0.32□□□□□ -2.36
CCDC7-208ENST00000537047 KIAA1549Q9HCM3 1950 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 FMN1Q68DA7 1419 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 RIMBP3CA6NJZ7 1639 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 RIMBP3BA6NNM3 1639 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 RIMBP3Q9UFD9 1639 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 OR2T8A6NH00 312 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 TIMM17BO60830 172 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 OR7C1O76099 320 aaPredicted RBP0.32□□□□□ -2.36
CCDC7-208ENST00000537047 SRIP30626 198 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 RNASE4P34096 147 aaKnown RBP0.32□□□□□ -2.36
CCDC7-208ENST00000537047 SPA17Q15506 151 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 RRN3P1Q2M238 152 aa0.32□□□□□ -2.36
CCDC7-208ENST00000537047 C22orf39Q6P5X5 142 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms