RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 TRAV2A0A0B4J234 112 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 SMIM31A0A1B0GVY4 71 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 ANKRD20A5PA0PJZ0 165 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 FAM90A26D6RGX4 464 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 PRSS46E5RG02 174 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 CYB5BO43169 146 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 TBPP20226 339 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 OR10J1P30954 320 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 SNCAP37840 140 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 NPBWR1P48145 328 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 SPCS3P61009 180 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 ZNF90Q03938 601 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 ZNF79Q15937 498 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 PSMG4Q5JS54 123 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 TMEM182Q6ZP80 229 aaPredicted RBP6.2□□□□□ -1.42
PABPC1-202ENST00000517403 RBPMSQ93062 196 aaKnown RBP6.2□□□□□ -1.42
PABPC1-202ENST00000517403 RAB40CQ96S21 281 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 GINS3Q9BRX5 216 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 RBKSQ9H477 322 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 VCX3AQ9NNX9 186 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 TMEM56-RWDD3S4R434 201 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 V9GYH0 126 aa6.2□□□□□ -1.42
PABPC1-202ENST00000517403 F6UB75 175 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 H3BMQ9 156 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 RGS5O15539 181 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 BUB3O43684 328 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 PITX3O75364 302 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 PRM2P04554 102 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 IL4P05112 153 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 PSG1P11464 419 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 NPPCP23582 126 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 NPY1RP25929 384 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 FXYD7P58549 80 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 RPP30P78346 268 aaKnown RBP6.19□□□□□ -1.42
PABPC1-202ENST00000517403 KLF9Q13886 244 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-202ENST00000517403 C12orf74Q32Q52 190 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 CLVS1Q8IUQ0 354 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-202ENST00000517403 ZNF709Q8N972 641 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 OR51G1Q8NGK1 321 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 OR52E5Q8NH55 327 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 ACY3Q96HD9 319 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 GRAMD2BQ96HH9 432 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 C20orf173Q96LM9 149 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 HSPB7Q9UBY9 170 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 NACAE9PAV3 2078 aa6.19□□□□□ -1.42
PABPC1-202ENST00000517403 H3BMM0 161 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 DNASE2O00115 360 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-202ENST00000517403 CTDSPLO15194 276 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 GSTZ1O43708 216 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-202ENST00000517403 TOMM40O96008 361 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 HNRNPCP07910 306 aaKnown RBP eCLIP6.18□□□□□ -1.425e-7■■■■□ 21.2
PABPC1-202ENST00000517403 TNFSF8P32971 234 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 YPEL3P61236 119 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-202ENST00000517403 DHRS2Q13268 280 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 CCDC71LQ8N9Z2 235 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 ZFAND1Q8TCF1 268 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 METTL26Q96S19 204 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 MRPS26Q9BYN8 205 aaKnown RBP6.18□□□□□ -1.42
PABPC1-202ENST00000517403 CCDC59Q9P031 241 aaKnown RBP6.18□□□□□ -1.42
PABPC1-202ENST00000517403 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
PABPC1-202ENST00000517403 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 CEBPZOSA8MTT3 80 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 ZNF705FA8MVS1 300 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 IGLL5B9A064 214 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 CORTO00230 105 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 CCNKO75909 580 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 IGKV3-20P01619 116 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 ZNF705DP0CH99 300 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 ZNF705BP0CI00 300 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 AKAIN1P0CW23 69 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 IAPPP10997 89 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 S100GP29377 79 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 HTR2BP41595 481 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 IL18Q14116 193 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 GAMTQ14353 236 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 SURF2Q15527 256 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 ZNF705AQ6ZN79 300 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 GPR141Q7Z602 305 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 STHQ8IWL8 128 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 OR1S2Q8NGQ3 325 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 RNASE11Q8TAA1 199 aaKnown RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 AP3S1Q92572 193 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 RRNAD1Q96FB5 475 aaKnown RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 SLC35B3Q9H1N7 401 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 XCL2Q9UBD3 114 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 KLK5Q9Y337 293 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-202ENST00000517403 ABCA13Q86UQ4 5058 aa6.17□□□□□ -1.42
PABPC1-202ENST00000517403 HELTA6NFD8 242 aa6.16□□□□□ -1.42
PABPC1-202ENST00000517403 RTL8CO15255 209 aa6.16□□□□□ -1.42
PABPC1-202ENST00000517403 HLA-DRB4P13762 266 aa6.16□□□□□ -1.42
PABPC1-202ENST00000517403 GATA2P23769 480 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-202ENST00000517403 SSBP1Q04837 148 aaKnown RBP6.16□□□□□ -1.42
PABPC1-202ENST00000517403 OR2F1Q13607 317 aa6.16□□□□□ -1.42
PABPC1-202ENST00000517403 AMTNQ6UX39 209 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms