RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 TRGV8A0A0C4DH27 118 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 TRBV6-1A0A0K0K1D8 114 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 C19orf71A6NCJ1 209 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 LINC01546A6NGU7 62 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 CCDC179H3BU77 68 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 CHEK1O14757 476 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 SNCGO76070 127 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 FAM106CPP0CH98 169 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 C8orf88P0DMB2 117 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 GRNP28799 593 aaKnown RBP4.84□□□□□ -1.63
LINC01340-201ENST00000504012 KIR2DL1P43626 348 aaPredicted RBP4.84□□□□□ -1.63
LINC01340-201ENST00000504012 SMCPP49901 116 aaPredicted RBP4.84□□□□□ -1.63
LINC01340-201ENST00000504012 RIGQ13278 110 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF77Q15935 545 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 FAM106AQ4KMX7 169 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 TMEM196Q5HYL7 178 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 PLA2G2CQ5R387 149 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 Q6ZR03 302 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 SLC25A48Q6ZT89 311 aaKnown RBP4.84□□□□□ -1.63
LINC01340-201ENST00000504012 SHISA5Q8N114 240 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 RBMXL3Q8N7X1 1067 aaKnown RBP4.84□□□□□ -1.63
LINC01340-201ENST00000504012 STPG3Q8N7X2 389 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 OR13C6PQ8NH95 151 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 MRAPQ8TCY5 172 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF414Q96IQ9 312 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 RASL11BQ9BPW5 248 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 MLST8Q9BVC4 326 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 PPDPFQ9H3Y8 114 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 PLEKHA3Q9HB20 300 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 NHP2Q9NX24 153 aaKnown RBP4.84□□□□□ -1.63
LINC01340-201ENST00000504012 TCF19Q9Y242 345 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 U3KQK5 164 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 TRBV25-1A0A075B6N4 114 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 IGKV3D-11A0A0A0MRZ8 115 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 DLL1O00548 723 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 SYNGR3O43761 229 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 WISP1O95388 367 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 NCR2O95944 276 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 APOHP02749 345 aaPredicted RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 MYOD1P15172 320 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 MALP21145 153 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 DUTP33316 252 aaKnown RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 PLA2G5P39877 138 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 UCNP55089 124 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 DSCR4P56555 118 aaPredicted RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 SEC61GP60059 68 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 RPS21P63220 83 aaKnown RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 GTF3C1Q12789 2109 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 DIAPH2-AS1Q14236 149 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 TBC1D28Q2M2D7 210 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 MEIG1Q5JSS6 88 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 KLF17Q5JT82 389 aaPredicted RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 FAM182BQ5T319 152 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 C17orf99Q6UX52 265 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 NFE4Q86UQ8 179 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 PRSS3P2Q8NHM4 247 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 RASL10AQ92737 203 aa4.83□□□□□ -1.64
LINC01340-201ENST00000504012 HSD17B10Q99714 261 aaKnown RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 AMMECR1Q9Y4X0 333 aaPredicted RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 COL5A1P20908 1838 aaPredicted RBP4.83□□□□□ -1.64
LINC01340-201ENST00000504012 A8MWV9 139 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 TMEM150CB9EJG8 249 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 J3KT08 172 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 PEX7O00628 323 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 HOXA3O43365 443 aaPredicted RBP4.82□□□□□ -1.64
LINC01340-201ENST00000504012 CEACAM4O75871 244 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 HBDP02042 147 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 CSN3P07498 182 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 DEFA4P12838 97 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 B4GALT1P15291 398 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 COL8A1P27658 744 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 CTGFP29279 349 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 MYCNOSP40205 109 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 PCBD1P61457 104 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 FKBP1BP68106 108 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 PAX8Q06710 450 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 FHL3Q13643 280 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 CST6Q15828 149 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 SPRNQ5BIV9 151 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 ZNF497Q6ZNH5 498 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 ZNF493Q6ZR52 646 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 MIR17HGQ75NE6 70 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 FAM90A1Q86YD7 464 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 PCP2Q8IVA1 136 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 ZNF784Q8NCA9 323 aaPredicted RBP4.82□□□□□ -1.64
LINC01340-201ENST00000504012 OR11H6Q8NGC7 330 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 ZNRF2Q8NHG8 242 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 MAFAQ8NHW3 353 aaPredicted RBP4.82□□□□□ -1.64
LINC01340-201ENST00000504012 IFI27L1Q96BM0 104 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 ZNF503Q96F45 646 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 AJUBAQ96IF1 538 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 ZNF488Q96MN9 340 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 LINC01587Q99440 93 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 NABP2Q9BQ15 211 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 IMUPQ9GZP8 106 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 PRDM14Q9GZV8 571 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 SIRPDQ9H106 197 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 FBXL15Q9H469 300 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 DLL3Q9NYJ7 618 aa4.82□□□□□ -1.64
LINC01340-201ENST00000504012 MUC22E2RYF6 1773 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms