RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 OR8D4Q8NGM9 314 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 CANT1Q8WVQ1 401 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 C1orf54Q8WWF1 131 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 DEDD2Q8WXF8 326 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 SCGB3A1Q96QR1 104 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 CKLFQ9UBR5 152 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 NAT8Q9UHE5 227 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 MED31Q9Y3C7 131 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 BCL9O00512 1426 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 TECPR2O15040 1411 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 PRRC2AP48634 2157 aaKnown RBP2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 SIPA1L1O43166 1804 aa2.91□□□□□ -1.94
TM9SF3-202ENST00000443638 SHANK3Q9BYB0 1731 aa2.9□□□□□ -1.94
TM9SF3-202ENST00000443638 ATP10BO94823 1461 aa2.9□□□□□ -1.94
TM9SF3-202ENST00000443638 PLXNB1O43157 2135 aa2.9□□□□□ -1.94
TM9SF3-202ENST00000443638 LRP5O75197 1615 aa2.9□□□□□ -1.94
TM9SF3-202ENST00000443638 RAPGEF6Q8TEU7 1601 aa2.9□□□□□ -1.94
TM9SF3-202ENST00000443638 TRAV7A0A075B6U4 112 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 TRAV36DV7A0A075B6V5 113 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 A0A087X0T9 212 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 TRDV1A0A1B0GX56 115 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 A0A1W2PNM2 257 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 TMEM189A5PLL7 270 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 MEIS3P1A6NDR6 274 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 ARRDC5A6NEK1 342 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 TPST1O60507 370 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 C1QCP02747 245 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 C1orf140Q5VVS0 124 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 HRCT1Q6UXD1 115 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 LRRC28Q86X40 367 aaPredicted RBP2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 OTORQ9NRC9 128 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 OSTCQ9NRP0 149 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 HSPB8Q9UJY1 196 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 FAM135BQ49AJ0 1406 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 CEP350Q5VT06 3117 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 CCDC171Q6TFL3 1326 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 CDK12Q9NYV4 1490 aaPredicted RBP2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 ABCA9Q8IUA7 1624 aa2.9□□□□□ -1.95
TM9SF3-202ENST00000443638 EFCAB5A4FU69 1503 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 TMEM256-PLSCR3K7ERE1 68 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 BCL2P10415 239 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 S100PP25815 95 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 DNAJB13P59910 316 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 PSG9Q00887 426 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 LY6EQ16553 131 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 RTL8BQ17RB0 113 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 LYZL1Q6UWQ5 148 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 SIGLECL1Q8N7X8 197 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 ISOC1Q96CN7 298 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 SCAPERQ9BY12 1400 aa2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 MRPL16Q9NX20 251 aaKnown RBP2.89□□□□□ -1.95
TM9SF3-202ENST00000443638 ZMYM4Q5VZL5 1548 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.88□□□□□ -1.952e-7■■■□□ 18.3
TM9SF3-202ENST00000443638 ABCA8O94911 1581 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 ATP6V1G2-DDX39BF2Z307 99 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 C3orf84H3BNL1 204 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 SLC22A1O15245 554 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 DLEU1O43261 78 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 OR2T1O43869 369 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 CREBL2O60519 120 aaPredicted RBP2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 HTR1AP08908 422 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 UBBP0CG47 229 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 MPC1LP0DKB6 136 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 EIF5AP63241 154 aaKnown RBP2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 PLCXD2Q0VAA5 305 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 IDO2Q6ZQW0 420 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 C3orf56Q8N813 242 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 HIST1H2BLQ99880 126 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 MRPL32Q9BYC8 188 aaKnown RBP2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 LAMTOR2Q9Y2Q5 125 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 ROBO1Q9Y6N7 1651 aa2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 SUPT6HQ7KZ85 1726 aaKnown RBP2.88□□□□□ -1.95
TM9SF3-202ENST00000443638 CEP170BQ9Y4F5 1589 aaPredicted RBP2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 PRR14LQ5THK1 2151 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 RNF17Q9BXT8 1623 aaKnown RBP2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 XIRP1Q702N8 1843 aaKnown RBP2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 A0A0J9YX75 114 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 CCDC160A6NGH7 325 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 OVOL1O14753 267 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 RTL8CO15255 209 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 GGCTO75223 188 aaKnown RBP2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 CLPSP04118 112 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 DEFA4P12838 97 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 NFYAP23511 347 aaPredicted RBP2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 S100A11P31949 105 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 SRP14P37108 136 aaKnown RBP2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 C22orf39Q6P5X5 142 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 CROCCP2Q86T23 111 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 OR4C16Q8NGL9 310 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 SLC25A21Q9BQT8 299 aaPredicted RBP2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 YIPF3Q9GZM5 350 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 EPDR1Q9UM22 224 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 RNF11Q9Y3C5 154 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 ZNF518AQ6AHZ1 1483 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 MAGI2Q86UL8 1455 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 BCL9LQ86UU0 1499 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 MYH10P35580 1976 aa2.87□□□□□ -1.95
TM9SF3-202ENST00000443638 IQGAP2Q13576 1575 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms