RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 C7orf71A4D174 169 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 C5orf63A6NC05 138 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM250H0YL14 139 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 J3QRE1 110 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 M0R143 59 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 IGKV2D-40P01614 121 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 DANCRP0C864 163 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM170BQ5T4T1 132 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 Q6ZR03 302 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 C1QL4Q86Z23 238 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 EPDR1Q9UM22 224 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TRBV9A0A0B4J1U6 114 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 SCO2A0A1W2PP80 73 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 FGF16O43320 207 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 NDUFS7O75251 213 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM50AO95807 157 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 PYYP10082 97 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 IFI27P40305 119 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 PARLQ9H300 379 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 SOX21Q9Y651 276 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 IGLV3-9A0A075B6K5 115 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 RBMY1BA6NDE4 496 aaKnown RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 RBMY1EA6NEQ0 496 aaKnown RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 RBMY1DP0C7P1 496 aaKnown RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 RBMY1A1P0DJD3 496 aaKnown RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 RBMY1CP0DJD4 496 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 DNLZQ5SXM8 178 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 ISOC2Q96AB3 205 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 RMI2Q96E14 147 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 IFT22Q9H7X7 185 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 TRAV3A0A0B4J244 114 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 A0A1B0GUT8 65 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 A6NDN8 102 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 CCL24O00175 119 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 CGB3P0DN86 165 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 PKIAP61925 76 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF833PQ6ZTB9 187 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 SCRT1Q9BWW7 348 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 SRRM4A7MD48 611 aaKnown RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 H3BUA1 57 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 ITGB1BP1O14713 200 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 FHITP49789 147 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 JOSD1Q15040 202 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-203ENST00000409101 XCL2Q9UBD3 114 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 CLDN16Q9Y5I7 305 aa4.06□□□□□ -1.76
SCN3A-203ENST00000409101 IGKV3D-20A0A0C4DH25 116 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 G3V318 75 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 CD28P10747 220 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 HOXA5P20719 270 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 COL4A4P53420 1690 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-203ENST00000409101 TCTEX1D4Q5JR98 221 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 RCC1LQ96I51 464 aaKnown RBP4.05□□□□□ -1.76
SCN3A-203ENST00000409101 NCOR1P1Q9H4R4 102 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 A0A1W2PNU3 283 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-203ENST00000409101 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF138P52744 262 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 NUDT10Q8NFP7 164 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 VCX2Q9H322 139 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 GBF1Q92538 1859 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 PLA2G2AP14555 144 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 TRAV5A0A0B4J249 113 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF503-AS2A6NEH8 195 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 PMS2P5A8MQ11 134 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 SRIP30626 198 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 ATP5G3P48201 142 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 DUX4L9Q6RFH8 374 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-203ENST00000409101 IGKV1D-8A0A087WSZ0 117 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 TGIF2-C20orf24A0A0A6YYL0 155 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 SHISA3A0PJX4 238 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 LINC00862A6NCI5 91 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF98A6NK75 572 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 F2Z2F3 143 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 NDUFA4O00483 81 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 NAPSAO96009 420 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 OTX1P32242 354 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-203ENST00000409101 H2BFSP57053 126 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 CKS1BP61024 79 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 LAIR2Q6ISS4 152 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 NXT2Q9NPJ8 142 aaKnown RBP4.05□□□□□ -1.76
SCN3A-203ENST00000409101 LINC00473A8K010 186 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 NPIPB5A8MRT5 1133 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 DIRC3C9JPN6 131 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 IGHV4-38-2P0DP08 117 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 ZNRD1Q9P1U0 126 aa4.05□□□□□ -1.76
SCN3A-203ENST00000409101 ATP5LO75964 103 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 PPIFP30405 207 aaKnown RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 CFHR3Q02985 330 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 FOXE3Q13461 319 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF506Q5JVG8 444 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM136Q6ZRR5 245 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 HAPLN4Q86UW8 402 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 LINC00311Q8N616 119 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 SEPSECSQ9HD40 501 aaKnown RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM160Q9NX00 188 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 KAAG1Q9UBP8 84 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 NDUFB8O95169 186 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 SNRPEP62304 92 aaKnown RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 PSG3Q16557 428 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 C17orf58Q2M2W7 97 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms