RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 GSG1LQ6UXU4 331 aa13.33□□□□□ -0.28
FXN-203ENST00000396366 PPP1R1AQ13522 171 aa13.32□□□□□ -0.28
FXN-203ENST00000396366 C11orf45Q8TAV5 145 aa13.32□□□□□ -0.28
FXN-203ENST00000396366 RAB40CQ96S21 281 aa13.32□□□□□ -0.28
FXN-203ENST00000396366 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
FXN-203ENST00000396366 FBXL17Q9UF56 701 aa13.32□□□□□ -0.28
FXN-203ENST00000396366 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
FXN-203ENST00000396366 KMT2AQ03164 3969 aa13.31□□□□□ -0.28
FXN-203ENST00000396366 SFT2D2O95562 160 aa13.31□□□□□ -0.28
FXN-203ENST00000396366 GPX4P36969 197 aaPredicted RBP13.31□□□□□ -0.28
FXN-203ENST00000396366 EIF2B2P49770 351 aaKnown RBP13.31□□□□□ -0.28
FXN-203ENST00000396366 AP2S1P53680 142 aaPredicted RBP13.31□□□□□ -0.28
FXN-203ENST00000396366 LRTM2Q8N967 370 aa13.31□□□□□ -0.28
FXN-203ENST00000396366 RNF125Q96EQ8 232 aa13.31□□□□□ -0.28
FXN-203ENST00000396366 SLC25A21Q9BQT8 299 aaPredicted RBP13.31□□□□□ -0.28
FXN-203ENST00000396366 PBDC1Q9BVG4 233 aa13.31□□□□□ -0.28
FXN-203ENST00000396366 MAGT1Q9H0U3 335 aa13.31□□□□□ -0.28
FXN-203ENST00000396366 C11orf68Q9H3H3 251 aaKnown RBP13.31□□□□□ -0.28
FXN-203ENST00000396366 DUXBA0A1W2PPF3 345 aa13.3□□□□□ -0.28
FXN-203ENST00000396366 ZFP92A6NM28 416 aa13.3□□□□□ -0.28
FXN-203ENST00000396366 FAM90A26D6RGX4 464 aa13.3□□□□□ -0.28
FXN-203ENST00000396366 HOXB5P09067 269 aa13.3□□□□□ -0.28
FXN-203ENST00000396366 SIGLEC15Q6ZMC9 328 aa13.3□□□□□ -0.28
FXN-203ENST00000396366 Q8NAQ8 132 aa13.3□□□□□ -0.28
FXN-203ENST00000396366 SRRQ9GZT4 340 aa13.3□□□□□ -0.28
FXN-203ENST00000396366 PAIP2BQ9ULR5 123 aaKnown RBP13.3□□□□□ -0.28
FXN-203ENST00000396366 RBMY1A1P0DJD3 496 aaKnown RBP13.29□□□□□ -0.28
FXN-203ENST00000396366 RBMY1CP0DJD4 496 aa13.29□□□□□ -0.28
FXN-203ENST00000396366 ATP5IP56385 69 aaPredicted RBP13.29□□□□□ -0.28
FXN-203ENST00000396366 DEFB1P60022 68 aa13.29□□□□□ -0.28
FXN-203ENST00000396366 OR2F1Q13607 317 aa13.29□□□□□ -0.28
FXN-203ENST00000396366 RBMY1FQ15415 496 aaKnown RBP13.29□□□□□ -0.28
FXN-203ENST00000396366 BAK1Q16611 211 aa13.29□□□□□ -0.28
FXN-203ENST00000396366 MORN3Q6PF18 240 aaPredicted RBP13.29□□□□□ -0.28
FXN-203ENST00000396366 SLC35E1Q96K37 410 aa13.29□□□□□ -0.28
FXN-203ENST00000396366 NRN1Q9NPD7 142 aa13.29□□□□□ -0.28
FXN-203ENST00000396366 IGKV1OR2-108A0A075B7D4 117 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 IGHV4-28A0A0C4DH34 117 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 SPP1P10451 314 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 CENPSQ8N2Z9 138 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 TMED3Q9Y3Q3 217 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 X6R8D5 127 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 VPS13DQ5THJ4 4388 aa13.28□□□□□ -0.28
FXN-203ENST00000396366 LINC00854A0A1B0GVQ3 168 aa13.27□□□□□ -0.29
FXN-203ENST00000396366 WRBO00258 174 aa13.27□□□□□ -0.29
FXN-203ENST00000396366 SLC25A6P12236 298 aa13.27□□□□□ -0.29
FXN-203ENST00000396366 LYZP61626 148 aa13.27□□□□□ -0.29
FXN-203ENST00000396366 SPANXN2Q5MJ10 180 aa13.27□□□□□ -0.29
FXN-203ENST00000396366 GGNBP1Q5YKI7 109 aa13.27□□□□□ -0.29
FXN-203ENST00000396366 WDR12Q9GZL7 423 aaKnown RBP13.27□□□□□ -0.29
FXN-203ENST00000396366 FLVCR2Q9UPI3 526 aa13.27□□□□□ -0.29
FXN-203ENST00000396366 SYNGR2O43760 224 aa13.26□□□□□ -0.29
FXN-203ENST00000396366 ADAP1O75689 374 aa13.26□□□□□ -0.29
FXN-203ENST00000396366 SNRPD3P62318 126 aaKnown RBP13.26□□□□□ -0.29
FXN-203ENST00000396366 RAB11AP62491 216 aa13.26□□□□□ -0.29
FXN-203ENST00000396366 RPP25LQ8N5L8 163 aaKnown RBP13.26□□□□□ -0.29
FXN-203ENST00000396366 DEDD2Q8WXF8 326 aa13.26□□□□□ -0.29
FXN-203ENST00000396366 MFFQ9GZY8 342 aa13.26□□□□□ -0.29
FXN-203ENST00000396366 FRAS1Q86XX4 4008 aa13.26□□□□□ -0.29
FXN-203ENST00000396366 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
FXN-203ENST00000396366 PIGBOS1A0A0B4J2F0 54 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 C9orf170A2RU37 121 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 ZNF705EA8MWA4 302 aaPredicted RBP13.25□□□□□ -0.29
FXN-203ENST00000396366 SNRPGP15A8MWD9 76 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 PRSS46E5RG02 174 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 H3BMM0 161 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 MED6O75586 246 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 TMEM41BQ5BJD5 291 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 GDF5OSQ5U4N7 250 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 TRGV9Q99603 122 aa13.25□□□□□ -0.29
FXN-203ENST00000396366 SDHCQ99643 169 aaPredicted RBP13.25□□□□□ -0.29
FXN-203ENST00000396366 DNAH10Q8IVF4 4471 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 H3BP45 60 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 ZNF701M0R085 212 aaPredicted RBP13.24□□□□□ -0.29
FXN-203ENST00000396366 DEDDO75618 318 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 SPANXN5Q5MJ07 72 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 OR8G2PQ6IF36 304 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
FXN-203ENST00000396366 THAP8Q8NA92 274 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 LINC00052Q96N35 136 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 SEPSECSQ9HD40 501 aaKnown RBP13.24□□□□□ -0.29
FXN-203ENST00000396366 XCL2Q9UBD3 114 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 TBC1D24Q9ULP9 559 aa13.24□□□□□ -0.29
FXN-203ENST00000396366 NDUFB6O95139 128 aa13.23□□□□□ -0.29
FXN-203ENST00000396366 IGKV3-20P01619 116 aa13.23□□□□□ -0.29
FXN-203ENST00000396366 MIFP14174 115 aa13.23□□□□□ -0.29
FXN-203ENST00000396366 GATA2P23769 480 aaPredicted RBP13.23□□□□□ -0.29
FXN-203ENST00000396366 INPP1P49441 399 aa13.23□□□□□ -0.29
FXN-203ENST00000396366 TRIQKQ629K1 86 aa13.23□□□□□ -0.29
FXN-203ENST00000396366 FABP1P07148 127 aa13.22□□□□□ -0.29
FXN-203ENST00000396366 HLA-DMBP28068 263 aa13.22□□□□□ -0.29
FXN-203ENST00000396366 FXYD7P58549 80 aa13.22□□□□□ -0.29
FXN-203ENST00000396366 POLR2GP62487 172 aaKnown RBP eCLIP13.22□□□□□ -0.29
FXN-203ENST00000396366 C2CD4CQ8TF44 421 aa13.22□□□□□ -0.29
FXN-203ENST00000396366 PPP1R14BQ96C90 147 aa13.22□□□□□ -0.29
FXN-203ENST00000396366 CIB3Q96Q77 187 aaPredicted RBP13.22□□□□□ -0.29
FXN-203ENST00000396366 NAP1L6A6NFF2 107 aa13.21□□□□□ -0.29
FXN-203ENST00000396366 SOCS3O14543 225 aa13.21□□□□□ -0.29
FXN-203ENST00000396366 OR4E1P0C645 316 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms