RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 DLX4Q92988 240 aaPredicted RBP12.28□□□□□ -0.44
LMX1B-201ENST00000355497 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 GGTLC1Q9BX51 225 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 LSM4Q9Y4Z0 139 aaKnown RBP12.28□□□□□ -0.44
LMX1B-201ENST00000355497 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 ZNF474Q6S9Z5 364 aaPredicted RBP12.28□□□□□ -0.44
LMX1B-201ENST00000355497 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 KLF12Q9Y4X4 402 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 TCRAP04437 139 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 CD5P06127 495 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 ZNF124Q15973 351 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.44
LMX1B-201ENST00000355497 IGHV2-26A0A0B4J1V2 119 aa12.27□□□□□ -0.44
LMX1B-201ENST00000355497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.27□□□□□ -0.44
LMX1B-201ENST00000355497 MLNRO43193 412 aa12.27□□□□□ -0.44
LMX1B-201ENST00000355497 IGHV1-46P01743 117 aa12.27□□□□□ -0.44
LMX1B-201ENST00000355497 RPRMLQ8N4K4 120 aa12.27□□□□□ -0.44
LMX1B-201ENST00000355497 C11orf44Q8N8P7 122 aa12.27□□□□□ -0.44
LMX1B-201ENST00000355497 TRGV1A0A0A0MS02 117 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 HOXD3P31249 432 aaPredicted RBP12.27□□□□□ -0.45
LMX1B-201ENST00000355497 ERCC8Q13216 396 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 C15orf32Q32M92 178 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 MAJINQ3KP22 176 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 ACTL10Q5JWF8 245 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 VMO1Q7Z5L0 202 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 A0A1B0GW64 132 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 VCYO14598 125 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 PSCAO43653 123 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 SH2D1AO60880 128 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 MYO7AQ13402 2215 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 BRWD1Q9NSI6 2320 aa12.27□□□□□ -0.45
LMX1B-201ENST00000355497 ZCCHC24Q8N2G6 241 aaKnown RBP12.26□□□□□ -0.45
LMX1B-201ENST00000355497 CITED1Q99966 193 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 PSG1P11464 419 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 C1orf194Q5T5A4 169 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 CCDC88CQ9P219 2028 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 ZNF138P52744 262 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 PAQR4Q8N4S7 273 aaPredicted RBP12.26□□□□□ -0.45
LMX1B-201ENST00000355497 SELENOKQ9Y6D0 94 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 RGPD3A6NKT7 1758 aaPredicted RBP12.26□□□□□ -0.45
LMX1B-201ENST00000355497 TDRD15B5MCY1 1934 aaKnown RBP12.26□□□□□ -0.45
LMX1B-201ENST00000355497 KIAA0100Q14667 2235 aaKnown RBP12.26□□□□□ -0.45
LMX1B-201ENST00000355497 IGKV1D-8A0A087WSZ0 117 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
LMX1B-201ENST00000355497 STRCP1A6NGW2 1772 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 SUMO4Q6EEV6 95 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 TRGV9Q99603 122 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 ZNF319Q9P2F9 582 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 SCN4AP35499 1836 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 DICER1Q9UPY3 1922 aaKnown RBP12.25□□□□□ -0.45
LMX1B-201ENST00000355497 IGLV3-32A0A0A0MS00 114 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 FXYD7P58549 80 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 MYMXA0A1B0GTQ4 84 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 LILRA1O75019 489 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 DSCR9P59020 149 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 DEFB104AQ8WTQ1 72 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 CSTL1Q9H114 145 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 PRDM6Q9NQX0 595 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 SPRR3Q9UBC9 169 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 DOCK5Q9H7D0 1870 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 COLCA2A8K830 154 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 SPSB3Q6PJ21 355 aa12.25□□□□□ -0.45
LMX1B-201ENST00000355497 TRAV1-1A0A0B4J248 108 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 PRR31Q5SQ13 230 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 PLSCR4Q9NRQ2 329 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 SPAG17Q6Q759 2223 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 A0A087WV48 116 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 C9orf139Q6ZV77 190 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 SRRM4A7MD48 611 aaKnown RBP12.24□□□□□ -0.45
LMX1B-201ENST00000355497 IGHV3-53P01767 116 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 A0A087X0K7 114 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 TRBV7-1A0A0A6YYK4 115 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 PSG3Q16557 428 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 TPTE2P1Q5T6R2 138 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 C9orf153Q5TBE3 101 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 RPUSD1Q9UJJ7 312 aaKnown RBP12.24□□□□□ -0.45
LMX1B-201ENST00000355497 MCM3APO60318 1980 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 IGHV1-3A0A0C4DH29 117 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 SPINK8P0C7L1 97 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 LINC00477Q96M19 166 aa12.24□□□□□ -0.45
LMX1B-201ENST00000355497 IGLV3-12A0A075B6K2 115 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 LOC102723996A0A087X1L8 192 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 LINC01551Q86U37 167 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 NUP35Q8NFH5 326 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 C10orf55Q5SWW7 151 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 F5P12259 2224 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 J3QRE1 110 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 IGHV1-8P0DP01 117 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 TMEM200BQ69YZ2 307 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 AGMATQ9BSE5 352 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 DLEU1O43261 78 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 LYPD3O95274 346 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
LMX1B-201ENST00000355497 IGLV3-19P01714 112 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms