RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 IAPPP10997 89 aa14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 ATF4P18848 351 aaPredicted RBP14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 GPX4P36969 197 aaPredicted RBP14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 GGNBP1Q5YKI7 109 aa14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 STXBP6Q8NFX7 210 aa14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 WDR12Q9GZL7 423 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 RABAC1Q9UI14 185 aa14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 FLVCR2Q9UPI3 526 aa14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 C9orf170A2RU37 121 aa14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 MPTX1A8MV57 137 aa14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 LYRM1O43325 122 aa14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 RD3LP0DJH9 198 aa14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 RPL11P62913 178 aaKnown RBP14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 ZNF90Q03938 601 aa14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 TRPT1Q86TN4 253 aaKnown RBP14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 COQ8AQ8NI60 647 aa14.49□□□□□ -0.09
PDZRN3-202ENST00000308537 IFNA4P05014 189 aa14.48□□□□□ -0.09
PDZRN3-202ENST00000308537 HOXB5P09067 269 aa14.48□□□□□ -0.09
PDZRN3-202ENST00000308537 ZNF846Q147U1 533 aa14.48□□□□□ -0.09
PDZRN3-202ENST00000308537 OR51G1Q8NGK1 321 aa14.48□□□□□ -0.09
PDZRN3-202ENST00000308537 KMT2AQ03164 3969 aa14.48□□□□□ -0.09
PDZRN3-202ENST00000308537 EPPK1P58107 5090 aaKnown RBP14.48□□□□□ -0.09
PDZRN3-202ENST00000308537 ADAP1O75689 374 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 ZNF688P0C7X2 276 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 DHRS2Q13268 280 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 C4orf46Q504U0 113 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 MZT2BQ6NZ67 158 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 THAP8Q8NA92 274 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 GATAD1Q8WUU5 269 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 RNF125Q96EQ8 232 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 MAGT1Q9H0U3 335 aa14.47□□□□□ -0.09
PDZRN3-202ENST00000308537 HELTA6NFD8 242 aa14.46□□□□□ -0.09
PDZRN3-202ENST00000308537 SYNGR2O43760 224 aa14.46□□□□□ -0.09
PDZRN3-202ENST00000308537 MED6O75586 246 aa14.46□□□□□ -0.09
PDZRN3-202ENST00000308537 IFNA21P01568 189 aa14.46□□□□□ -0.09
PDZRN3-202ENST00000308537 OR4E1P0C645 316 aa14.46□□□□□ -0.09
PDZRN3-202ENST00000308537 ID3Q02535 119 aa14.46□□□□□ -0.09
PDZRN3-202ENST00000308537 KNCNA6PVL3 124 aa14.45□□□□□ -0.1
PDZRN3-202ENST00000308537 PLA2G10O15496 165 aa14.45□□□□□ -0.1
PDZRN3-202ENST00000308537 CA1P00915 261 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-202ENST00000308537 C4BPBP20851 252 aa14.45□□□□□ -0.1
PDZRN3-202ENST00000308537 NARS2Q96I59 477 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-202ENST00000308537 TRGV9Q99603 122 aa14.45□□□□□ -0.1
PDZRN3-202ENST00000308537 ANXA7P20073 488 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-202ENST00000308537 EIF2B2P49770 351 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-202ENST00000308537 OR4D5Q8NGN0 318 aa14.44□□□□□ -0.1
PDZRN3-202ENST00000308537 SLC35E1Q96K37 410 aa14.44□□□□□ -0.1
PDZRN3-202ENST00000308537 RARRES2Q99969 163 aa14.44□□□□□ -0.1
PDZRN3-202ENST00000308537 FAM240BA0A1B0GVZ2 78 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 ZFP92A6NM28 416 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 PMS2P5A8MQ11 134 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 WRBO00258 174 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 AP2S1P53680 142 aaPredicted RBP14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 PMS2P11Q13670 270 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 OR8G2PQ6IF36 304 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 SIGLEC15Q6ZMC9 328 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 CSNK1G2-AS1Q8NCQ2 148 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 OR11H2Q8NH07 326 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 C17orf77Q96MU5 243 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 CIB3Q96Q77 187 aaPredicted RBP14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 C20orf85Q9H1P6 137 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 C11orf68Q9H3H3 251 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 SEPSECSQ9HD40 501 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 NRN1Q9NPD7 142 aa14.43□□□□□ -0.1
PDZRN3-202ENST00000308537 SOCS3O14543 225 aa14.42□□□□□ -0.1
PDZRN3-202ENST00000308537 TCRBP04435 133 aa14.42□□□□□ -0.1
PDZRN3-202ENST00000308537 RAB11AP62491 216 aa14.42□□□□□ -0.1
PDZRN3-202ENST00000308537 RPP30P78346 268 aaKnown RBP14.42□□□□□ -0.1
PDZRN3-202ENST00000308537 TMEM182Q6ZP80 229 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-202ENST00000308537 STHQ8IWL8 128 aa14.42□□□□□ -0.1
PDZRN3-202ENST00000308537 VPS13DQ5THJ4 4388 aa14.42□□□□□ -0.1
PDZRN3-202ENST00000308537 H3BP45 60 aa14.41□□□□□ -0.1
PDZRN3-202ENST00000308537 PAX9P55771 341 aa14.41□□□□□ -0.1
PDZRN3-202ENST00000308537 POLR2GP62487 172 aaKnown RBP eCLIP14.41□□□□□ -0.1
PDZRN3-202ENST00000308537 PSMG4Q5JS54 123 aa14.41□□□□□ -0.1
PDZRN3-202ENST00000308537 Q8NAQ8 132 aa14.41□□□□□ -0.1
PDZRN3-202ENST00000308537 RAB40CQ96S21 281 aa14.41□□□□□ -0.1
PDZRN3-202ENST00000308537 PBDC1Q9BVG4 233 aa14.41□□□□□ -0.1
PDZRN3-202ENST00000308537 UPK1BO75841 260 aa14.4□□□□□ -0.1
PDZRN3-202ENST00000308537 OR2F1Q13607 317 aa14.4□□□□□ -0.1
PDZRN3-202ENST00000308537 ACTL10Q5JWF8 245 aa14.4□□□□□ -0.1
PDZRN3-202ENST00000308537 CEMP1Q6PRD7 247 aaPredicted RBP14.4□□□□□ -0.1
PDZRN3-202ENST00000308537 GSG1LQ6UXU4 331 aa14.4□□□□□ -0.1
PDZRN3-202ENST00000308537 CXorf65A6NEN9 183 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 ZNF705EA8MWA4 302 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 CCNKO75909 580 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 JTBO76095 146 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 H2AFB2P0C5Z0 115 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 SPP1P10451 314 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 LYZP61626 148 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 ASAH1Q13510 395 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 SPANXN5Q5MJ07 72 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 ACOT7LQ6ZUV0 252 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 ENKURQ8TC29 256 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 MITD1Q8WV92 249 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 LINC00476Q8WZB0 136 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 NUDT15Q9NV35 164 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 X6R8D5 127 aa14.39□□□□□ -0.11
PDZRN3-202ENST00000308537 TRAV6A0A075B6T7 132 aa14.38□□□□□ -0.11
PDZRN3-202ENST00000308537 NUPR2A6NF83 97 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms