RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 PDCD11Q14690 1871 aaKnown RBP17.47■□□□□ 0.39
SH3D19-211ENST00000604030 PSMB11A5LHX3 300 aa17.47■□□□□ 0.39
SH3D19-211ENST00000604030 ST6GALNAC3Q8NDV1 305 aa17.47■□□□□ 0.39
SH3D19-211ENST00000604030 IGHV3-23P01764 117 aa17.46■□□□□ 0.39
SH3D19-211ENST00000604030 RNASE6Q93091 150 aaKnown RBP17.46■□□□□ 0.39
SH3D19-211ENST00000604030 RNASE4P34096 147 aaKnown RBP17.46■□□□□ 0.39
SH3D19-211ENST00000604030 TRGV9Q99603 122 aa17.46■□□□□ 0.39
SH3D19-211ENST00000604030 DEPPQ9NTK1 212 aa17.46■□□□□ 0.39
SH3D19-211ENST00000604030 PLNP26678 52 aa17.46■□□□□ 0.39
SH3D19-211ENST00000604030 RPP25LQ8N5L8 163 aaKnown RBP17.46■□□□□ 0.39
SH3D19-211ENST00000604030 RNF182Q8N6D2 247 aa17.45■□□□□ 0.38
SH3D19-211ENST00000604030 C17orf82Q86X59 251 aaPredicted RBP17.45■□□□□ 0.38
SH3D19-211ENST00000604030 CHTOPQ9Y3Y2 248 aaKnown RBP17.45■□□□□ 0.38
SH3D19-211ENST00000604030 OOSP1A8MZH6 123 aa17.45■□□□□ 0.38
SH3D19-211ENST00000604030 SIGMAR1Q99720 223 aa17.45■□□□□ 0.38
SH3D19-211ENST00000604030 FOXF2Q12947 444 aa17.44■□□□□ 0.38
SH3D19-211ENST00000604030 FAM186AA6NE01 2351 aa17.44■□□□□ 0.38
SH3D19-211ENST00000604030 TRGV11A0A075B6L2 103 aa17.44■□□□□ 0.38
SH3D19-211ENST00000604030 IGKV3-20P01619 116 aa17.44■□□□□ 0.38
SH3D19-211ENST00000604030 FAM71F2Q6NXP2 309 aa17.44■□□□□ 0.38
SH3D19-211ENST00000604030 ZNF479Q96JC4 524 aa17.44■□□□□ 0.38
SH3D19-211ENST00000604030 IGHV1-18A0A0C4DH31 117 aa17.44■□□□□ 0.38
SH3D19-211ENST00000604030 PNRC2Q9NPJ4 139 aaKnown RBP17.44■□□□□ 0.38
SH3D19-211ENST00000604030 IGHV3-49A0A0A0MS15 119 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 TRAV8-2A0A0B4J237 113 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 IGHV3-66A0A0C4DH42 116 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 GGNQ86UU5 652 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 LYPD1Q8N2G4 141 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 TMEM167AQ8TBQ9 72 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 NYNRINQ9P2P1 1898 aaKnown RBP17.43■□□□□ 0.38
SH3D19-211ENST00000604030 TRBV7-9A0A0J9YWB2 115 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 EFNA2O43921 213 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 IGKV1-5P01602 117 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 S4R3C0 116 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 LCTP09848 1927 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 CACNA1IQ9P0X4 2223 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 DLEU1O43261 78 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 FOXL2NBQ6ZUU3 175 aa17.43■□□□□ 0.38
SH3D19-211ENST00000604030 MUC21A0A0G2JKD1 596 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 MUC21A0A140T8X8 626 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 A8MWV9 139 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 MUC21Q5SSG8 566 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 VKORC1Q9BQB6 163 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 FNDC4Q9H6D8 234 aaPredicted RBP17.42■□□□□ 0.38
SH3D19-211ENST00000604030 NTN3O00634 580 aaPredicted RBP17.42■□□□□ 0.38
SH3D19-211ENST00000604030 IGKV1-27A0A075B6S5 117 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 ASCL4Q6XD76 172 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 MEGF9Q9H1U4 602 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 IL18BPO95998 194 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 RPRMLQ8N4K4 120 aa17.42■□□□□ 0.38
SH3D19-211ENST00000604030 SCN8AQ9UQD0 1980 aa17.41■□□□□ 0.38
SH3D19-211ENST00000604030 GZMBP10144 247 aa17.41■□□□□ 0.38
SH3D19-211ENST00000604030 FAM168AQ92567 244 aa17.41■□□□□ 0.38
SH3D19-211ENST00000604030 SLC25A39Q9BZJ4 359 aaPredicted RBP17.41■□□□□ 0.38
SH3D19-211ENST00000604030 LTBRP36941 435 aa17.41■□□□□ 0.38
SH3D19-211ENST00000604030 SAMD5Q5TGI4 173 aa17.41■□□□□ 0.38
SH3D19-211ENST00000604030 MYOFQ9NZM1 2061 aa17.41■□□□□ 0.38
SH3D19-211ENST00000604030 MGST2Q99735 147 aa17.41■□□□□ 0.38
SH3D19-211ENST00000604030 IGKV3OR2-268A0A0C4DH90 116 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 FGFBP3Q8TAT2 258 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 ZNF815PA8K554 130 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 RHOGP84095 191 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 LAGE3Q14657 143 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 AHCTF1Q8WYP5 2266 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.4■□□□□ 0.38
SH3D19-211ENST00000604030 CD7P09564 240 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 GFI1BQ5VTD9 330 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 LINC01587Q99440 93 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 TDRD6O60522 2096 aaKnown RBP17.4■□□□□ 0.38
SH3D19-211ENST00000604030 IGHV1-46P01743 117 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 TCRAP04437 139 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 LDLRAD2Q5SZI1 272 aa17.4■□□□□ 0.38
SH3D19-211ENST00000604030 A0A1B0GWJ7 208 aa17.39■□□□□ 0.38
SH3D19-211ENST00000604030 CFAP161Q6P656 301 aa17.39■□□□□ 0.38
SH3D19-211ENST00000604030 PLSCR4Q9NRQ2 329 aa17.39■□□□□ 0.38
SH3D19-211ENST00000604030 GAGE13Q4V321 117 aa17.39■□□□□ 0.37
SH3D19-211ENST00000604030 HEATR5BQ9P2D3 2071 aa17.39■□□□□ 0.37
SH3D19-211ENST00000604030 DMRTA2Q96SC8 542 aa17.39■□□□□ 0.37
SH3D19-211ENST00000604030 CHD5Q8TDI0 1954 aa17.39■□□□□ 0.37
SH3D19-211ENST00000604030 NPFFR1Q9GZQ6 430 aa17.38■□□□□ 0.37
SH3D19-211ENST00000604030 MBNL3Q9NUK0 354 aaKnown RBP17.38■□□□□ 0.37
SH3D19-211ENST00000604030 PF4P02776 101 aa17.38■□□□□ 0.37
SH3D19-211ENST00000604030 CLPSP04118 112 aa17.38■□□□□ 0.37
SH3D19-211ENST00000604030 PYY3Q5JQD4 70 aa17.38■□□□□ 0.37
SH3D19-211ENST00000604030 TMEM238C9JI98 176 aa17.38■□□□□ 0.37
SH3D19-211ENST00000604030 ITGB1BP1O14713 200 aa17.38■□□□□ 0.37
SH3D19-211ENST00000604030 PAX2Q02962 417 aa17.38■□□□□ 0.37
SH3D19-211ENST00000604030 ALPK2Q86TB3 2170 aa17.37■□□□□ 0.37
SH3D19-211ENST00000604030 SPSB3Q6PJ21 355 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 KIR3DL3Q8N743 410 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 NUP37Q8NFH4 326 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 ITLN2Q8WWU7 325 aaPredicted RBP17.36■□□□□ 0.37
SH3D19-211ENST00000604030 SEPSECSQ9HD40 501 aaKnown RBP17.36■□□□□ 0.37
SH3D19-211ENST00000604030 SPRR3Q9UBC9 169 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 SRSF8Q9BRL6 282 aaKnown RBP17.36■□□□□ 0.37
SH3D19-211ENST00000604030 TIMM23O14925 209 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 GFRA4Q9GZZ7 299 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 IGHV3OR16-10A0A075B7F0 116 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 MINOS1Q5TGZ0 78 aa17.36■□□□□ 0.37
SH3D19-211ENST00000604030 MORN3Q6PF18 240 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms