RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MGAT4CQ9UBM8 478 aa12.22□□□□□ -0.45
SHKBP1-215ENST00000597649 ZNF320A2RRD8 509 aa12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 INS-IGF2F8WCM5 200 aa12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 SYNGR2O43760 224 aa12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 SIX6O95475 246 aa12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 ARL3P36405 182 aa12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 ID3Q02535 119 aa12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 OR4D5Q8NGN0 318 aa12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 CIB3Q96Q77 187 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 F11RQ9Y624 299 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-215ENST00000597649 A8MWP6 167 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 SPRY2O43597 315 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 IFNA10P01566 189 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 IAPPP10997 89 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 BMI1P35226 326 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 HTR2BP41595 481 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 RPP30P78346 268 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 UNQ9165/PRO28630Q6UXU0 137 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 NOXA1Q86UR1 476 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 OR1P1Q8NH06 330 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 TP53TG1Q9Y2A0 90 aa12.2□□□□□ -0.46
SHKBP1-215ENST00000597649 C8orf88P0DMB2 117 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 CYCSP99999 105 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 DEFB135Q30KP9 77 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 FAM106AQ4KMX7 169 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 FAM209BQ5JX69 171 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 Q6ZWC4 215 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 ZNF114Q8NC26 417 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 SLC24A4Q8NFF2 622 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 KLK5Q9Y337 293 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 LSM5Q9Y4Y9 91 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 U3KQ87 197 aa12.19□□□□□ -0.46
SHKBP1-215ENST00000597649 IGLV11-55A0A075B6I3 123 aa12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 L7N2F9 121 aa12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 SSSCA1O60232 199 aa12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 MBPP02686 304 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 S100A10P60903 97 aa12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 VAMP2P63027 116 aa12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 KLK9Q2XQG4 91 aa12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 PINX1Q96BK5 328 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
SHKBP1-215ENST00000597649 CORTO00230 105 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 CLEC3BP05452 202 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 RNASE2P10153 161 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 ATF4P18848 351 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 PVALBP20472 110 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 NPY1RP25929 384 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 RRAS2P62070 204 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 FCN2Q15485 313 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 LGALS9CQ6DKI2 356 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 PHLDA1Q8WV24 401 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 EEF1AKMT3Q96AZ1 226 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 RNF183Q96D59 192 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 CXorf58Q96LI9 332 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 RAB40CQ96S21 281 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 NMES1Q9C002 83 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 PSENENQ9NZ42 101 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 ABCA13Q86UQ4 5058 aa12.17□□□□□ -0.46
SHKBP1-215ENST00000597649 DYNC1H1Q14204 4646 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 MFSD2BA6NFX1 497 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 RLN2P04090 185 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 IFNA4P05014 189 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 MFAP2P55001 183 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 RAB11AP62491 216 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 C2orf83Q53S99 150 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 SPANXN5Q5MJ07 72 aa12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-215ENST00000597649 IGHV3-35A0A0C4DH35 117 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 K7EPK0 472 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 APOC4P55056 127 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 H2BFSP57053 126 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 PRR20EP86478 221 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 PRR20CP86479 221 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 PRR20DP86480 221 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 PRR20BP86481 221 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 PRR20AP86496 221 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 RAB32Q13637 225 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 BSXQ3C1V8 233 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 LRRC37A5PQ49AS3 106 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 RBPMS2Q6ZRY4 209 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 VN1R17PQ8TDU5 208 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 SMIM8Q96KF7 97 aa12.15□□□□□ -0.46
SHKBP1-215ENST00000597649 IGHV3-21A0A0B4J1V1 117 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 RPS10-NUDT3A0A1W2PQS6 291 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 UBE2CO00762 179 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 CXCL3P19876 107 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 OPRK1P41145 380 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 BCAP31P51572 246 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 TAS2R30P59541 319 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 IL15RAQ13261 267 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 OR11H7Q8NGC8 314 aa12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 RNASEH2CQ8TDP1 164 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms