RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PAIP2BQ9ULR5 123 aaKnown RBP8.87□□□□□ -0.99
RAB5C-204ENST00000547517 TRAV30A0A087WSZ9 112 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 TRAV14DV4A0A0A6YYC5 116 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 IGHV3-66A0A0C4DH42 116 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 OR11H12B2RN74 326 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 CHEK1O14757 476 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 TSPAN4O14817 238 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 MED6O75586 246 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 IFNA21P01568 189 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 IGKV1-17P01599 117 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 TCRBP04435 133 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 IGLC1P0CG04 106 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 OR10J1P30954 320 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 LAMTOR1Q6IAA8 161 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 Q6ZNX1 250 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 OR1S2Q8NGQ3 325 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 NPIPB3Q92617 1050 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 RNF2Q99496 336 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 TBC1D24Q9ULP9 559 aa8.86□□□□□ -0.99
RAB5C-204ENST00000547517 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 IGKV3-7A0A075B6H7 116 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 H3BP45 60 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 WRBO00258 174 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 SYNGR2O43760 224 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
RAB5C-204ENST00000547517 BMI1P35226 326 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 MITD1Q8WV92 249 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 ST8SIA2Q92186 375 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 RCHY1Q96PM5 261 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 CIB3Q96Q77 187 aaPredicted RBP8.85□□□□□ -0.99
RAB5C-204ENST00000547517 ZMAT4Q9H898 229 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 UBQLN2Q9UHD9 624 aa8.85□□□□□ -0.99
RAB5C-204ENST00000547517 FAM240BA0A1B0GVZ2 78 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 OR4C46A6NHA9 309 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 SSSCA1O60232 199 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 UPK1BO75841 260 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 SCGB1D2O95969 90 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 TFPI2P48307 235 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 RAB11AP62491 216 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 ASAH1Q13510 395 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 HAGHQ16775 308 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 MZT2BQ6NZ67 158 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 TCF24Q7RTU0 167 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 METTL26Q96S19 204 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 SEC22CQ9BRL7 303 aa8.84□□□□□ -0.99
RAB5C-204ENST00000547517 RBMY1BA6NDE4 496 aaKnown RBP8.83□□□□□ -1
RAB5C-204ENST00000547517 RBMY1EA6NEQ0 496 aaKnown RBP8.83□□□□□ -1
RAB5C-204ENST00000547517 CCSO14618 274 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 RBMY1DP0C7P1 496 aaKnown RBP8.83□□□□□ -1
RAB5C-204ENST00000547517 NPPCP23582 126 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 NKX2-1P43699 371 aaPredicted RBP8.83□□□□□ -1
RAB5C-204ENST00000547517 ATP5IP56385 69 aaPredicted RBP8.83□□□□□ -1
RAB5C-204ENST00000547517 POLR2GP62487 172 aaKnown RBP eCLIP8.83□□□□□ -1
RAB5C-204ENST00000547517 RPP30P78346 268 aaKnown RBP8.83□□□□□ -1
RAB5C-204ENST00000547517 IAH1Q2TAA2 248 aaPredicted RBP8.83□□□□□ -1
RAB5C-204ENST00000547517 SPANXN5Q5MJ07 72 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 OR4D5Q8NGN0 318 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 ENKURQ8TC29 256 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 Q8WTZ3 238 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 FAM210AQ96ND0 272 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 VSIRQ9H7M9 311 aa8.83□□□□□ -1
RAB5C-204ENST00000547517 A0A1B0GVG6 124 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 ZFP92A6NM28 416 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 TOMM40O96008 361 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 IL4P05112 153 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 HNRNPCP07910 306 aaKnown RBP eCLIP8.82□□□□□ -1
RAB5C-204ENST00000547517 GPX4P36969 197 aaPredicted RBP8.82□□□□□ -1
RAB5C-204ENST00000547517 YPEL3P61236 119 aaPredicted RBP8.82□□□□□ -1
RAB5C-204ENST00000547517 RPL11P62913 178 aaKnown RBP8.82□□□□□ -1
RAB5C-204ENST00000547517 ID3Q02535 119 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 GAMTQ14353 236 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 ODF3L2Q3SX64 289 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 FAM90A2PQ658T7 463 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 GBGT1Q8N5D6 347 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 ZNF431Q8TF32 576 aaPredicted RBP8.82□□□□□ -1
RAB5C-204ENST00000547517 NARS2Q96I59 477 aaKnown RBP8.82□□□□□ -1
RAB5C-204ENST00000547517 WWC2-AS2Q96NR7 200 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 SPATA25Q9BR10 227 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 TMEM231Q9H6L2 316 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 RETNQ9HD89 108 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 GSKIPQ9P0R6 139 aa8.82□□□□□ -1
RAB5C-204ENST00000547517 STRAPQ9Y3F4 350 aaKnown RBP8.82□□□□□ -1
RAB5C-204ENST00000547517 A0A1W2PS18 150 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 FAM25EA8MYX2 175 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 DFFBO76075 338 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 RD3LP0DJH9 198 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 CRYBB3P26998 211 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 P2RY1P47900 373 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 IFITM3Q01628 133 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 USF2Q15853 346 aaPredicted RBP8.81□□□□□ -1
RAB5C-204ENST00000547517 LINC00322Q6ZN03 302 aaPredicted RBP8.81□□□□□ -1
RAB5C-204ENST00000547517 WFDC3Q8IUB2 231 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 LILRB2Q8N423 598 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 ZBTB8BQ8NAP8 495 aaPredicted RBP8.81□□□□□ -1
RAB5C-204ENST00000547517 CITED4Q96RK1 184 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 PSENENQ9NZ42 101 aa8.81□□□□□ -1
RAB5C-204ENST00000547517 IGKV1D-37A0A075B6S9 117 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms