RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 TOP2AP11388 1531 aaKnown RBP1.25□□□□□ -2.21
CD44-234ENST00000531873 HEATR5BQ9P2D3 2071 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 PIK3C2GO75747 1445 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 DNAH12Q6ZR08 3092 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 FBN2P35556 2912 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 ZNF532Q9HCE3 1301 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 IGLV3-9A0A075B6K5 115 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 TRAV38-1A0A0B4J264 116 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 A0A1B0GVG6 124 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 ARRDC5A6NEK1 342 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 GGT3PA6NGU5 568 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 H3BRN7 92 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 H7C2G1 150 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 KLRC4O43908 158 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 CREBL2O60519 120 aaPredicted RBP1.25□□□□□ -2.21
CD44-234ENST00000531873 OR7C1O76099 320 aaPredicted RBP1.25□□□□□ -2.21
CD44-234ENST00000531873 SERPINA1P01009 418 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 IGHV3-7P01780 117 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 PSMB8P28062 276 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 HINT1P49773 126 aaPredicted RBP1.25□□□□□ -2.21
CD44-234ENST00000531873 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 HBA1P69905 142 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 BASP1P80723 227 aaKnown RBP1.25□□□□□ -2.21
CD44-234ENST00000531873 IBA57Q5T440 356 aaKnown RBP1.25□□□□□ -2.21
CD44-234ENST00000531873 AADACL3Q5VUY0 350 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 OR52L1Q8NGH7 329 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 TXNDC17Q9BRA2 123 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 TMEM147Q9BVK8 224 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 TRIM4Q9C037 500 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 CHST6Q9GZX3 395 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 TIMM9Q9Y5J7 89 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 TMEM56-RWDD3S4R434 201 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 CASZ1Q86V15 1759 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 POLR1AO95602 1720 aaPredicted RBP1.25□□□□□ -2.21
CD44-234ENST00000531873 NUP188Q5SRE5 1749 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 PBRM1Q86U86 1689 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 POLQO75417 2590 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 SAMD9LQ8IVG5 1584 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 MAST1Q9Y2H9 1570 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 CREBBPQ92793 2442 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 ERICH3Q5RHP9 1530 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 MYH3P11055 1940 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 MYH2Q9UKX2 1941 aa1.25□□□□□ -2.21
CD44-234ENST00000531873 C1orf167Q5SNV9 1468 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 CEP295Q9C0D2 2601 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 BRCA2P51587 3418 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 MYOFQ9NZM1 2061 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 ZC3H13Q5T200 1668 aaKnown RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 ITPR1Q14643 2758 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 EXOC1LA0A1B0GW35 172 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 FABP5P3A8MUU1 101 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 TRAPPC2LH3BP13 241 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 PDE6DO43924 150 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 NOS1APO75052 506 aaPredicted RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 S1PR2O95136 353 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 ZNF682O95780 498 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 PPBPP02775 128 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 SERPINA7P05543 415 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 SULT1A3P0DMM9 295 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 SULT1A4P0DMN0 295 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 SMIM10L2AP0DMW4 78 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 SMIM10L2BP0DMW5 78 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 CYBAP13498 195 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST1H2BOP23527 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 MSNP26038 577 aaKnown RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST1H2BBP33778 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST1H2BDP58876 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST1H2BCP62807 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 SPA17Q15506 151 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 TAF1AQ15573 450 aaPredicted RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST2H2BEQ16778 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 C12orf74Q32Q52 190 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 KRTAP13-4Q3LI77 160 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 PCOTHQ58A44 107 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 TMEM42Q69YG0 159 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 SMIM5Q71RC9 77 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 LRRC28Q86X40 367 aaPredicted RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 OR13C4Q8NGS5 318 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 OR10X1Q8NGY0 326 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 PHOSPHO2Q8TCD6 241 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 CT55Q8WUE5 264 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 H1FXQ92522 213 aaKnown RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 SLC7A6Q92536 515 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST1H2BHQ93079 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 TOMM6Q96B49 74 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST1H2BNQ99877 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 HIST1H2BMQ99879 126 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 C20orf27Q9GZN8 174 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 ARL2BPQ9Y2Y0 163 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 ABCA9Q8IUA7 1624 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 BRWD1Q9NSI6 2320 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 CFAP74Q9C0B2 1584 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 COL11A1P12107 1806 aaPredicted RBP1.24□□□□□ -2.21
CD44-234ENST00000531873 PLEKHH2Q8IVE3 1493 aa1.24□□□□□ -2.21
CD44-234ENST00000531873 RRBP1Q9P2E9 1410 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 KIAA1107Q9UPP5 1409 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ABCA3Q99758 1704 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 CR1P17927 2039 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ARHGEF10O15013 1369 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms