RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 IGLC1P0CG04 106 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 CNPY1Q3B7I2 92 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 GGNBP1Q5YKI7 109 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 ETFRF1Q6IPR1 90 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 CITED4Q96RK1 184 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 GINS3Q9BRX5 216 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 ANXA7P20073 488 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 NPPCP23582 126 aa12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 RND2P52198 227 aa12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 YPEL3P61236 119 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 ID3Q02535 119 aa12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 DHRS2Q13268 280 aa12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 OR1S2Q8NGQ3 325 aa12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 ST8SIA2Q92186 375 aa12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 SPATA25Q9BR10 227 aa12.01□□□□□ -0.49
PDLIM5-212ENST00000509333 CRYBB3P26998 211 aa12□□□□□ -0.49
PDLIM5-212ENST00000509333 LYG2Q86SG7 212 aa12□□□□□ -0.49
PDLIM5-212ENST00000509333 Q8WTZ3 238 aa12□□□□□ -0.49
PDLIM5-212ENST00000509333 FAM110AQ9BQ89 295 aa12□□□□□ -0.49
PDLIM5-212ENST00000509333 U3KQE9 123 aa12□□□□□ -0.49
PDLIM5-212ENST00000509333 OR4C46A6NHA9 309 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 LYRM1O43325 122 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 MED6O75586 246 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 ADAP1O75689 374 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 DFFBO76075 338 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 IFNA4P05014 189 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 CD5P06127 495 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 OR10J1P30954 320 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 GAMTQ14353 236 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 ODF3L2Q3SX64 289 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 TCF24Q7RTU0 167 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 MAGT1Q9H0U3 335 aa11.99□□□□□ -0.49
PDLIM5-212ENST00000509333 IGHV3-66A0A0C4DH42 116 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 SYNGR2O43760 224 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 TCRBP04435 133 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 IAPPP10997 89 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 COQ8AQ8NI60 647 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 ACY3Q96HD9 319 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 CCDC32Q9BV29 185 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 EDA2RQ9HAV5 297 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 UBQLN2Q9UHD9 624 aa11.98□□□□□ -0.49
PDLIM5-212ENST00000509333 DNAH7Q8WXX0 4024 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 LOC102724200A0A096LPH7 203 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 A0A1W2PS18 150 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 WRBO00258 174 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 RD3LP0DJH9 198 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 C4orf46Q504U0 113 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 MITD1Q8WV92 249 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 CIB3Q96Q77 187 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 METTL26Q96S19 204 aa11.97□□□□□ -0.49
PDLIM5-212ENST00000509333 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 IGKV1D-37A0A075B6S9 117 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 PSG1P11464 419 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 BMI1P35226 326 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 TFPI2P48307 235 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 RAB11AP62491 216 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 PAFAH1B2P68402 229 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 S100ZQ8WXG8 99 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 GGTLC1Q9BX51 225 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 MS4A6AQ9H2W1 248 aa11.96□□□□□ -0.49
PDLIM5-212ENST00000509333 KMT2CQ8NEZ4 4911 aaKnown RBP11.96□□□□□ -0.5
PDLIM5-212ENST00000509333 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
PDLIM5-212ENST00000509333 TOMM40O96008 361 aa11.95□□□□□ -0.5
PDLIM5-212ENST00000509333 IFNA21P01568 189 aa11.95□□□□□ -0.5
PDLIM5-212ENST00000509333 WFDC3Q8IUB2 231 aa11.95□□□□□ -0.5
PDLIM5-212ENST00000509333 OR4D5Q8NGN0 318 aa11.95□□□□□ -0.5
PDLIM5-212ENST00000509333 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
PDLIM5-212ENST00000509333 RETNQ9HD89 108 aa11.95□□□□□ -0.5
PDLIM5-212ENST00000509333 TRAV6A0A075B6T7 132 aa11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 PRSS46E5RG02 174 aa11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 PAX9P55771 341 aa11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 USF2Q15853 346 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 C16orf54Q6UWD8 224 aa11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 C20orf85Q9H1P6 137 aa11.94□□□□□ -0.5
PDLIM5-212ENST00000509333 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 IL4P05112 153 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 HNRNPCP07910 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 NKX2-1P43699 371 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 P2RY1P47900 373 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 ZNF90Q03938 601 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 ZNF124Q15973 351 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 MUC7Q8TAX7 377 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 SMIM8Q96KF7 97 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 TBC1D24Q9ULP9 559 aa11.93□□□□□ -0.5
PDLIM5-212ENST00000509333 IGKV1OR2-108A0A075B7D4 117 aa11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 BUB3O43684 328 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms