RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ROS1P08922 2347 aa1.12□□□□□ -2.23
CLK1-213ENST00000492793 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
CLK1-213ENST00000492793 TAF1LQ8IZX4 1826 aa1.12□□□□□ -2.23
CLK1-213ENST00000492793 TNRC6AQ8NDV7 1962 aaKnown RBP1.12□□□□□ -2.23
CLK1-213ENST00000492793 DENND4CQ5VZ89 1909 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 ROBO3Q96MS0 1386 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 TNRC6BQ9UPQ9 1833 aaKnown RBP1.11□□□□□ -2.23
CLK1-213ENST00000492793 OR2J2O76002 312 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 PROSCO94903 275 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 BAALC-AS2P0C853 105 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 PPIBP23284 216 aaKnown RBP1.11□□□□□ -2.23
CLK1-213ENST00000492793 RAB4BP61018 213 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 IAH1Q2TAA2 248 aaPredicted RBP1.11□□□□□ -2.23
CLK1-213ENST00000492793 OR51A2Q8NGJ7 313 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 KIFC1Q9BW19 673 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 RNASE7Q9H1E1 156 aaKnown RBP1.11□□□□□ -2.23
CLK1-213ENST00000492793 MIXL1Q9H2W2 232 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 ACER3Q9NUN7 267 aa1.11□□□□□ -2.23
CLK1-213ENST00000492793 A0A087X0T9 212 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 CYB5BO43169 146 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 OR2T1O43869 369 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 HYPMO75409 117 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 SERPINE1P05121 402 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 C8GP07360 202 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 OR4E1P0C645 316 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 HIST1H3AP68431 136 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 RHOGP84095 191 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 H3F3AP84243 136 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 C12orf74Q32Q52 190 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 LINC01554Q52M75 96 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 TMEM97Q5BJF2 176 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 OR8D4Q8NGM9 314 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 SFT2D1Q8WV19 159 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 BTF3L4Q96K17 158 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 SIGMAR1Q99720 223 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 C6orf62Q9GZU0 229 aaPredicted RBP1.1□□□□□ -2.23
CLK1-213ENST00000492793 FBXO5Q9UKT4 447 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 UTP11Q9Y3A2 253 aaKnown RBP1.1□□□□□ -2.23
CLK1-213ENST00000492793 C22orf24Q9Y442 160 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 SCN8AQ9UQD0 1980 aa1.1□□□□□ -2.23
CLK1-213ENST00000492793 RTL1A6NKG5 1358 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.23
CLK1-213ENST00000492793 CACNA1BQ00975 2339 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 ZNF682O95780 498 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 MIFP14174 115 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 ANP32AP39687 249 aaKnown RBP1.09□□□□□ -2.23
CLK1-213ENST00000492793 FAM19A2Q8N3H0 131 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 OR13D1Q8NGV5 346 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 FAM172AQ8WUF8 416 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 ITFG2Q969R8 447 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 C2orf50Q96LR7 162 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 HIST1H2BLQ99880 126 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 NHP2Q9NX24 153 aaKnown RBP1.09□□□□□ -2.23
CLK1-213ENST00000492793 TVP23BQ9NYZ1 205 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 SLC22A13Q9Y226 551 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 KIF1BO60333 1816 aa1.09□□□□□ -2.23
CLK1-213ENST00000492793 PIK3C2GO75747 1445 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 ZFYVE9O95405 1425 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 OBSL1O75147 1896 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 TRBV6-8A0A0A6YYG3 113 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 IGKV1-9A0A0C4DH69 117 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 AP3S2P59780 193 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 DEFB115Q30KQ5 88 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 BRMS1LQ5PSV4 323 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 LYRM7Q5U5X0 104 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 WFDC5Q8TCV5 224 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 EPDR1Q9UM22 224 aa1.08□□□□□ -2.24
CLK1-213ENST00000492793 FAM32AQ9Y421 112 aaKnown RBP1.08□□□□□ -2.24
CLK1-213ENST00000492793 CCDC144AA2RUR9 1427 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 C7orf71A4D174 169 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 CLDN25C9JDP6 229 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 J3QRK9 145 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 ERP29P30040 261 aaKnown RBP1.07□□□□□ -2.24
CLK1-213ENST00000492793 EIF5AP63241 154 aaKnown RBP1.07□□□□□ -2.24
CLK1-213ENST00000492793 Q6Q795 121 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 LCA10Q71F78 164 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 LINC00301Q8NCQ3 95 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 OR2T10Q8NGZ9 312 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 PRAP1Q96NZ9 151 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 NMNAT1Q9HAN9 279 aaPredicted RBP1.07□□□□□ -2.24
CLK1-213ENST00000492793 IDI2-AS1Q9NZ38 188 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 COL4A5P29400 1685 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 EML5Q05BV3 1969 aa1.07□□□□□ -2.24
CLK1-213ENST00000492793 NCOA1Q15788 1441 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 NEO1Q92859 1461 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 SNRNP200O75643 2136 aaKnown RBP1.06□□□□□ -2.24
CLK1-213ENST00000492793 SBF1O95248 1867 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 MED1Q15648 1581 aaPredicted RBP1.06□□□□□ -2.24
CLK1-213ENST00000492793 LYZL6O75951 148 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 SRP14P37108 136 aaKnown RBP1.06□□□□□ -2.24
CLK1-213ENST00000492793 CCL7P80098 99 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 FADDQ13158 208 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 PDE6HQ13956 83 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 TSNQ15631 228 aaKnown RBP1.06□□□□□ -2.24
CLK1-213ENST00000492793 LIN52Q52LA3 116 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 TEX261Q6UWH6 196 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 CLECL1Q8IZS7 167 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 Q8N814 137 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 OR52L1Q8NGH7 329 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 OR10J5Q8NHC4 309 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms