RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FOXH1O75593 365 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
PKP4-206ENST00000452162 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
PKP4-206ENST00000452162 SUB1P53999 127 aaKnown RBP eCLIP8.55□□□□□ -1.04
PKP4-206ENST00000452162 SNRPEP62304 92 aaKnown RBP8.55□□□□□ -1.04
PKP4-206ENST00000452162 LDLRAD2Q5SZI1 272 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 FAM78BQ5VT40 261 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 OR2T6Q8NHC8 308 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 RPEQ96AT9 228 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 SIGLEC9Q9Y336 463 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 YTHDF2Q9Y5A9 579 aaKnown RBP8.55□□□□□ -1.04
PKP4-206ENST00000452162 CLN5O75503 358 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 OR5G3P0C626 314 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 GATA2P23769 480 aaPredicted RBP8.55□□□□□ -1.04
PKP4-206ENST00000452162 C16orf54Q6UWD8 224 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 C16orf82Q7Z2V1 217 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 ZNF114Q8NC26 417 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 DOK5Q9P104 306 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 PSMB11A5LHX3 300 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 M0R1W7 72 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 ACTL6BO94805 426 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 NDUFB4O95168 129 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 MSMBP08118 114 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 RPL27AP46776 148 aaKnown RBP8.54□□□□□ -1.04
PKP4-206ENST00000452162 COMPP49747 757 aaPredicted RBP8.54□□□□□ -1.04
PKP4-206ENST00000452162 LCN2P80188 198 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 SSBP2P81877 361 aaPredicted RBP8.54□□□□□ -1.04
PKP4-206ENST00000452162 KIAA0141Q14154 515 aaPredicted RBP8.54□□□□□ -1.04
PKP4-206ENST00000452162 TPTE2P1Q5T6R2 138 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 OR11H6Q8NGC7 330 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 ACY3Q96HD9 319 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 C19orf24Q9BVV8 132 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 SSBP3Q9BWW4 388 aaPredicted RBP8.54□□□□□ -1.04
PKP4-206ENST00000452162 MXRA5Q9NR99 2828 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 NF1P21359 2839 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 LOC105371242A0A075B767 164 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 INAFM1C9JVW0 142 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 UBE2CO00762 179 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 MT-CO2P00403 227 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 REG1AP05451 166 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 HCP5Q6MZN7 132 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 THAP8Q8NA92 274 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 ZNF503Q96F45 646 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 HIF1ANQ9NWT6 349 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 MRPL36Q9P0J6 103 aaKnown RBP8.54□□□□□ -1.04
PKP4-206ENST00000452162 ARL2-SNX15V9GYD0 113 aa8.54□□□□□ -1.04
PKP4-206ENST00000452162 CUBNO60494 3623 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 JMJD1CQ15652 2540 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 IGKV1D-37A0A075B6S9 117 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 PFN1P07737 140 aaKnown RBP8.53□□□□□ -1.04
PKP4-206ENST00000452162 RPL35P42766 123 aaKnown RBP8.53□□□□□ -1.04
PKP4-206ENST00000452162 MFAP2P55001 183 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 ARF6P62330 175 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 TNXAQ16473 311 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
PKP4-206ENST00000452162 FAM210BQ96KR6 192 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 RNF5Q99942 180 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
PKP4-206ENST00000452162 METTL1Q9UBP6 276 aaKnown RBP8.53□□□□□ -1.04
PKP4-206ENST00000452162 NAV3Q8IVL0 2385 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 SCO2A0A1W2PP80 73 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 ODF3BA8MYP8 253 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 CRYGCP07315 174 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 AREGP15514 252 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 AKR1D1P51857 326 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 PPP1R27Q86WC6 154 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 TMEM37Q8WXS4 190 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 NPIPB3Q92617 1050 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 C11orf52Q96A22 123 aa8.53□□□□□ -1.04
PKP4-206ENST00000452162 TRBV20OR9-2A0A075B6H5 130 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 TCRBV4S1A1TA0A5B7 111 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 TEX22C9J3V5 150 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 H7BYZ3 331 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 TIMM23O14925 209 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 PRTN3P24158 256 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 HTR1DP28221 377 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 CFHR4Q92496 578 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 ANAPC16Q96DE5 110 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 PYGO2Q9BRQ0 406 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 MRPL32Q9BYC8 188 aaKnown RBP8.52□□□□□ -1.05
PKP4-206ENST00000452162 FBXL15Q9H469 300 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 TMEM167BQ9NRX6 74 aa8.52□□□□□ -1.05
PKP4-206ENST00000452162 IGHV3-48P01763 117 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 PAX2Q02962 417 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 KLRD1Q13241 179 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 PQLC2Q6ZP29 291 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 RNF2Q99496 336 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 SLC25A33Q9BSK2 321 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 DPM3Q9P2X0 92 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 TRAV20A0A0B4J274 112 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 AP4M1O00189 453 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 C8orf88P0DMB2 117 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 TAS2R45P59539 299 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 RUSC1-AS1Q66K80 236 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 C19orf35Q6ZS72 473 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 IL17RELQ6ZVW7 336 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms