RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 RFLNBQ8N5W9 214 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 MPC1Q9Y5U8 109 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 COL1A1P02452 1464 aaPredicted RBP5.29□□□□□ -1.56
CPS1-204ENST00000451903 SCN11AQ9UI33 1791 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 NDUFC1O43677 76 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 KISS1Q15726 138 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 ZNF493Q6ZR52 646 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 VSIG2Q96IQ7 327 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 NPCDR1Q9BY65 106 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 AGPAT4-IT1Q9H0P7 198 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 COL16A1Q07092 1604 aaPredicted RBP5.29□□□□□ -1.56
CPS1-204ENST00000451903 J3QQQ9 107 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 CCL21O00585 134 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 ZNHIT1O43257 154 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 TCF15Q12870 199 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 SPEM1Q8N4L4 309 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 C9orf85Q96MD7 179 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 CDK5RAP2Q96SN8 1893 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 DLL1O00548 723 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 SOCS3O14543 225 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 FOXE3Q13461 319 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 C1orf61Q13536 156 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 CARD19Q96LW7 228 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 SCGB3A1Q96QR1 104 aa5.29□□□□□ -1.56
CPS1-204ENST00000451903 VEGFBP49765 207 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 EBLN2Q6P2I7 272 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 C16orf52Q8NHV5 167 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 TRAV41A0A0B4J266 112 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 TRAV4A0A0B4J268 109 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 F2Z2F3 143 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 PRIMA1Q86XR5 153 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 SRSF12Q8WXF0 261 aaKnown RBP5.28□□□□□ -1.56
CPS1-204ENST00000451903 ZNF646O15015 1829 aaPredicted RBP5.28□□□□□ -1.56
CPS1-204ENST00000451903 GHRHP01286 108 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 TMEM230Q96A57 120 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 VWCEQ96DN2 955 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 UBL5Q9BZL1 73 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 METTL12A8MUP2 240 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 UBE2BP63146 152 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 RPL18Q07020 188 aaKnown RBP5.28□□□□□ -1.56
CPS1-204ENST00000451903 C10orf113Q5VZT2 155 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 PAQR4Q8N4S7 273 aaPredicted RBP5.28□□□□□ -1.56
CPS1-204ENST00000451903 TIMM17AQ99595 171 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 TP53TG1Q9Y2A0 90 aa5.28□□□□□ -1.56
CPS1-204ENST00000451903 FAM90A10PA6NDY2 464 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 FAM90A8PA6NJQ4 464 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 FAM90A24PP0C7X0 464 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 FXYD2P54710 66 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 NANOS3P60323 173 aaKnown RBP5.27□□□□□ -1.57
CPS1-204ENST00000451903 FAM78AQ5JUQ0 283 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 CCDC140Q96MF4 163 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 DSCR8Q96T75 97 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 ETV2O00321 342 aaPredicted RBP5.27□□□□□ -1.57
CPS1-204ENST00000451903 LIFP15018 202 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 RPL11P62913 178 aaKnown RBP5.27□□□□□ -1.57
CPS1-204ENST00000451903 HOXA4Q00056 320 aaPredicted RBP5.27□□□□□ -1.57
CPS1-204ENST00000451903 TMEM52BQ4KMG9 183 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 LINC00312Q9Y6C7 94 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 IGKV6D-41A0A0C4DH26 115 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.27□□□□□ -1.57
CPS1-204ENST00000451903 A8MZ25 164 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 VWC2LB2RUY7 222 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 CXorf67Q86X51 503 aaPredicted RBP5.27□□□□□ -1.57
CPS1-204ENST00000451903 FMC1Q96HJ9 113 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 C18orf12Q96KH6 178 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 GP9P14770 177 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 SLC25A48Q6ZT89 311 aaKnown RBP5.27□□□□□ -1.57
CPS1-204ENST00000451903 NPIPB3Q92617 1050 aa5.27□□□□□ -1.57
CPS1-204ENST00000451903 PTPRZ1P23471 2315 aaPredicted RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 TRAV26-2A0A0B4J265 109 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 TRBV10-2A0A0K0K1G8 114 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 SNRPD3P62318 126 aaKnown RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 LINC01620Q4KN68 170 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 ADAMTSL4Q6UY14 1074 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 CCL28Q9NRJ3 127 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 PHPT1Q9NRX4 125 aaPredicted RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 CALYQ9NYX4 217 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 SLC25A10Q9UBX3 287 aaPredicted RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 PSMB8P28062 276 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 ZFP36L1Q07352 338 aaKnown RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 MIC13Q5XKP0 118 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 MDFICQ9P1T7 246 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 FUSP35637 526 aaKnown RBP eCLIP5.26□□□□□ -1.57
CPS1-204ENST00000451903 RPS27P42677 84 aaKnown RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 MNX1P50219 401 aaPredicted RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 WFDC3Q8IUB2 231 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 LSM4Q9Y4Z0 139 aaKnown RBP5.26□□□□□ -1.57
CPS1-204ENST00000451903 ALS2Q96Q42 1657 aa5.26□□□□□ -1.57
CPS1-204ENST00000451903 NBL1P41271 181 aa5.25□□□□□ -1.57
CPS1-204ENST00000451903 ZNF818PQ6ZRF7 136 aa5.25□□□□□ -1.57
CPS1-204ENST00000451903 PRNTQ86SH4 94 aa5.25□□□□□ -1.57
CPS1-204ENST00000451903 MRPL53Q96EL3 112 aaKnown RBP5.25□□□□□ -1.57
CPS1-204ENST00000451903 TRGV9Q99603 122 aa5.25□□□□□ -1.57
CPS1-204ENST00000451903 PYGO1Q9Y3Y4 419 aa5.25□□□□□ -1.57
CPS1-204ENST00000451903 OTOFQ9HC10 1997 aa5.25□□□□□ -1.57
CPS1-204ENST00000451903 PRB4P10163 310 aaPredicted RBP5.25□□□□□ -1.57
CPS1-204ENST00000451903 CLDN2P57739 230 aa5.25□□□□□ -1.57
CPS1-204ENST00000451903 LOXL1Q08397 574 aaPredicted RBP5.25□□□□□ -1.57
CPS1-204ENST00000451903 EFNB3Q15768 340 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms