RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TIGITQ495A1 244 aa19.75■□□□□ 0.75
CDK9-202ENST00000421939 OR1S2Q8NGQ3 325 aa19.75■□□□□ 0.75
CDK9-202ENST00000421939 C20orf85Q9H1P6 137 aa19.75■□□□□ 0.75
CDK9-202ENST00000421939 MED6O75586 246 aa19.74■□□□□ 0.75
CDK9-202ENST00000421939 ADAP1O75689 374 aa19.74■□□□□ 0.75
CDK9-202ENST00000421939 IFNA4P05014 189 aa19.74■□□□□ 0.75
CDK9-202ENST00000421939 IAPPP10997 89 aa19.74■□□□□ 0.75
CDK9-202ENST00000421939 IGHV3OR16-13A0A075B7E8 117 aa19.73■□□□□ 0.75
CDK9-202ENST00000421939 IGHV3-74A0A0B4J1X5 117 aa19.73■□□□□ 0.75
CDK9-202ENST00000421939 OR10J1P30954 320 aa19.73■□□□□ 0.75
CDK9-202ENST00000421939 LINC00322Q6ZN03 302 aaPredicted RBP19.73■□□□□ 0.75
CDK9-202ENST00000421939 ACY3Q96HD9 319 aa19.73■□□□□ 0.75
CDK9-202ENST00000421939 PTTG2Q9NZH5 202 aa19.73■□□□□ 0.75
CDK9-202ENST00000421939 OR4C46A6NHA9 309 aa19.72■□□□□ 0.75
CDK9-202ENST00000421939 NPIPB3Q92617 1050 aa19.72■□□□□ 0.75
CDK9-202ENST00000421939 CIB3Q96Q77 187 aaPredicted RBP19.72■□□□□ 0.75
CDK9-202ENST00000421939 VSIRQ9H7M9 311 aa19.72■□□□□ 0.75
CDK9-202ENST00000421939 RBMY1BA6NDE4 496 aaKnown RBP19.71■□□□□ 0.75
CDK9-202ENST00000421939 RBMY1EA6NEQ0 496 aaKnown RBP19.71■□□□□ 0.75
CDK9-202ENST00000421939 RBMY1DP0C7P1 496 aaKnown RBP19.71■□□□□ 0.75
CDK9-202ENST00000421939 ST8SIA2Q92186 375 aa19.71■□□□□ 0.75
CDK9-202ENST00000421939 SPATA25Q9BR10 227 aa19.71■□□□□ 0.75
CDK9-202ENST00000421939 MAGT1Q9H0U3 335 aa19.71■□□□□ 0.75
CDK9-202ENST00000421939 SYNGR2O43760 224 aa19.7■□□□□ 0.74
CDK9-202ENST00000421939 IFNA21P01568 189 aa19.7■□□□□ 0.74
CDK9-202ENST00000421939 APOHP02749 345 aaPredicted RBP19.7■□□□□ 0.74
CDK9-202ENST00000421939 TCRBP04435 133 aa19.7■□□□□ 0.74
CDK9-202ENST00000421939 METTL26Q96S19 204 aa19.7■□□□□ 0.74
CDK9-202ENST00000421939 MPTX1A8MV57 137 aa19.69■□□□□ 0.74
CDK9-202ENST00000421939 YPEL3P61236 119 aaPredicted RBP19.69■□□□□ 0.74
CDK9-202ENST00000421939 RAB11AP62491 216 aa19.69■□□□□ 0.74
CDK9-202ENST00000421939 FAM90A2PQ658T7 463 aa19.69■□□□□ 0.74
CDK9-202ENST00000421939 TCF24Q7RTU0 167 aa19.69■□□□□ 0.74
CDK9-202ENST00000421939 MITD1Q8WV92 249 aa19.69■□□□□ 0.74
CDK9-202ENST00000421939 TMEM231Q9H6L2 316 aa19.69■□□□□ 0.74
CDK9-202ENST00000421939 NUDT15Q9NV35 164 aa19.69■□□□□ 0.74
CDK9-202ENST00000421939 NBEAL2Q6ZNJ1 2754 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 IGHV3-66A0A0C4DH42 116 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 WRBO00258 174 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 CD5P06127 495 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 NPPCP23582 126 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 GPX4P36969 197 aaPredicted RBP19.68■□□□□ 0.74
CDK9-202ENST00000421939 Q8WTZ3 238 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 SLC35E1Q96K37 410 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 WDR12Q9GZL7 423 aaKnown RBP19.68■□□□□ 0.74
CDK9-202ENST00000421939 UBQLN2Q9UHD9 624 aa19.68■□□□□ 0.74
CDK9-202ENST00000421939 PAIP2BQ9ULR5 123 aaKnown RBP19.68■□□□□ 0.74
CDK9-202ENST00000421939 IGKV3-7A0A075B6H7 116 aa19.67■□□□□ 0.74
CDK9-202ENST00000421939 TRAV6A0A075B6T7 132 aa19.67■□□□□ 0.74
CDK9-202ENST00000421939 CRYBB3P26998 211 aa19.67■□□□□ 0.74
CDK9-202ENST00000421939 RPP30P78346 268 aaKnown RBP19.67■□□□□ 0.74
CDK9-202ENST00000421939 ODF3L2Q3SX64 289 aa19.67■□□□□ 0.74
CDK9-202ENST00000421939 TBC1D24Q9ULP9 559 aa19.67■□□□□ 0.74
CDK9-202ENST00000421939 A0A1W2PS18 150 aa19.66■□□□□ 0.74
CDK9-202ENST00000421939 LILRB2Q8N423 598 aa19.66■□□□□ 0.74
CDK9-202ENST00000421939 OR4D5Q8NGN0 318 aa19.66■□□□□ 0.74
CDK9-202ENST00000421939 NARS2Q96I59 477 aaKnown RBP19.66■□□□□ 0.74
CDK9-202ENST00000421939 FAM110AQ9BQ89 295 aa19.66■□□□□ 0.74
CDK9-202ENST00000421939 TOMM40O96008 361 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 TFPI2P48307 235 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 ID3Q02535 119 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 GAMTQ14353 236 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 ZNF846Q147U1 533 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 CITED4Q96RK1 184 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 GGTLC1Q9BX51 225 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 BATF3Q9NR55 127 aa19.65■□□□□ 0.74
CDK9-202ENST00000421939 FAM240BA0A1B0GVZ2 78 aa19.64■□□□□ 0.73
CDK9-202ENST00000421939 DFFBO76075 338 aa19.64■□□□□ 0.73
CDK9-202ENST00000421939 RD3LP0DJH9 198 aa19.64■□□□□ 0.73
CDK9-202ENST00000421939 NKX2-1P43699 371 aaPredicted RBP19.64■□□□□ 0.73
CDK9-202ENST00000421939 POLR2GP62487 172 aaKnown RBP eCLIP19.64■□□□□ 0.73
CDK9-202ENST00000421939 ASAH1Q13510 395 aa19.64■□□□□ 0.73
CDK9-202ENST00000421939 MZT2BQ6NZ67 158 aa19.64■□□□□ 0.73
CDK9-202ENST00000421939 GBGT1Q8N5D6 347 aa19.64■□□□□ 0.73
CDK9-202ENST00000421939 LOC102724200A0A096LPH7 203 aaPredicted RBP19.63■□□□□ 0.73
CDK9-202ENST00000421939 H3BP45 60 aa19.63■□□□□ 0.73
CDK9-202ENST00000421939 IL4P05112 153 aa19.63■□□□□ 0.73
CDK9-202ENST00000421939 PAFAH1B2P68402 229 aa19.63■□□□□ 0.73
CDK9-202ENST00000421939 IAH1Q2TAA2 248 aaPredicted RBP19.63■□□□□ 0.73
CDK9-202ENST00000421939 SPANXN5Q5MJ07 72 aa19.63■□□□□ 0.73
CDK9-202ENST00000421939 RETNQ9HD89 108 aa19.63■□□□□ 0.73
CDK9-202ENST00000421939 ZFP92A6NM28 416 aa19.62■□□□□ 0.73
CDK9-202ENST00000421939 UPK1BO75841 260 aa19.62■□□□□ 0.73
CDK9-202ENST00000421939 P2RY1P47900 373 aa19.62■□□□□ 0.73
CDK9-202ENST00000421939 RPL11P62913 178 aaKnown RBP19.62■□□□□ 0.73
CDK9-202ENST00000421939 USF2Q15853 346 aaPredicted RBP19.62■□□□□ 0.73
CDK9-202ENST00000421939 STRAPQ9Y3F4 350 aaKnown RBP19.62■□□□□ 0.73
CDK9-202ENST00000421939 SSSCA1O60232 199 aa19.61■□□□□ 0.73
CDK9-202ENST00000421939 HNRNPCP07910 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
CDK9-202ENST00000421939 H2AFB2P0C5Z0 115 aa19.61■□□□□ 0.73
CDK9-202ENST00000421939 PSG1P11464 419 aa19.61■□□□□ 0.73
CDK9-202ENST00000421939 ZBTB8BQ8NAP8 495 aaPredicted RBP19.61■□□□□ 0.73
CDK9-202ENST00000421939 ZNF431Q8TF32 576 aaPredicted RBP19.61■□□□□ 0.73
CDK9-202ENST00000421939 GRAMD2BQ96HH9 432 aa19.61■□□□□ 0.73
CDK9-202ENST00000421939 SEC22CQ9BRL7 303 aa19.61■□□□□ 0.73
CDK9-202ENST00000421939 MS4A6AQ9H2W1 248 aa19.61■□□□□ 0.73
CDK9-202ENST00000421939 U3KQE9 123 aa19.61■□□□□ 0.73
CDK9-202ENST00000421939 IGKV1D-37A0A075B6S9 117 aa19.6■□□□□ 0.73
CDK9-202ENST00000421939 TRAV2A0A0B4J234 112 aa19.6■□□□□ 0.73
CDK9-202ENST00000421939 PRSS46E5RG02 174 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms