RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 HIST3H2BBQ8N257 126 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 OR8D4Q8NGM9 314 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 OR13C4Q8NGS5 318 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 FAM213BQ8TBF2 198 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 TMEM254Q8TBM7 123 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 GPR146Q96CH1 333 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 IMP4Q96G21 291 aaKnown RBP-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 MSANTD3Q96H12 275 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 TP53RKQ96S44 253 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 WDR61Q9GZS3 305 aaKnown RBP-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 FAM96AQ9H5X1 160 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 C14orf132Q9NPU4 83 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 TP73-AS1Q9UF72 201 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 POLR1DQ9Y2S0 133 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 V9GYY5 206 aaPredicted RBP-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 TOPBP1Q92547 1522 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 USH2AO75445 5202 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 SIP14410 1827 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 KIF13BQ9NQT8 1826 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 SETD2Q9BYW2 2564 aaPredicted RBP-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 MYCBP2O75592 4640 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 PLXNA4Q9HCM2 1894 aa-0.71□□□□□ -2.52
MIR548I3-201ENST00000408378 MYH10P35580 1976 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 UBR4Q5T4S7 5183 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 LPAP08519 4548 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 TRAV23DV6A0A075B6W5 121 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 LOC107984156A0A0G2JMH3 177 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 FTCDNL1E5RQL4 147 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 F5H768 121 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 F8VZ95 297 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 TOX3O15405 576 aaPredicted RBP-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 MAGEA2P43356 314 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 MAP2K4P45985 399 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 HBA1P69905 142 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 BATFQ16520 125 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 BRMS1LQ5PSV4 323 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 COPS6Q7L5N1 327 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 VMO1Q7Z5L0 202 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 TEN1Q86WV5 123 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 ARL17AQ8IVW1 177 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 LINC00301Q8NCQ3 95 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 TMEM161BQ8NDZ6 487 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 OR2T35Q8NGX2 323 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 DIRAS2Q96HU8 199 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 GPER1Q99527 375 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 CCL19Q99731 98 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 OR51V1Q9H2C8 321 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 OR51I2Q9H344 312 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 SPANXB1Q9NS25 103 aaPredicted RBP-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 SLC39A9Q9NUM3 307 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 SBF1O95248 1867 aa-0.72□□□□□ -2.52
MIR548I3-201ENST00000408378 MYO7AQ13402 2215 aa-0.72□□□□□ -2.53
MIR548I3-201ENST00000408378 DCCP43146 1447 aa-0.72□□□□□ -2.53
MIR548I3-201ENST00000408378 CECR2Q9BXF3 1484 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 ODAMA1E959 279 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 C7orf71A4D174 169 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 JMJD7-PLA2G4BH0Y9G9 81 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 MKRN2OSH3BPM6 223 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 GPR31O00270 319 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 CD14P08571 375 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 CDC34P49427 236 aaPredicted RBP-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 PPP1R1AQ13522 171 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 FBXO48Q5FWF7 155 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 C2orf82Q6UX34 121 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 ZNF833PQ6ZTB9 187 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 SLC51BQ86UW2 128 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 CD302Q8IX05 232 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 OR52R1Q8NGF1 315 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 H1FXQ92522 213 aaKnown RBP-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 KIFC1Q9BW19 673 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 OSTCQ9NRP0 149 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 ERGIC3Q9Y282 383 aa-0.73□□□□□ -2.53
MIR548I3-201ENST00000408378 CREBBPQ92793 2442 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 LAMA5O15230 3695 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 BUB1B-PAK6H3BSN5 160 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 LY6G6CO95867 125 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 PPYP01298 95 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 APOA1P02647 267 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 OR4E1P0C645 316 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 RD3LP0DJH9 198 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 COX7CP15954 63 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 UGT2B7P16662 529 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 SDHAF4Q5VUM1 108 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 Q6ZS49 121 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 Q8IYB0 196 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 LRRC25Q8N386 305 aaPredicted RBP-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 Q8N402 240 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 DEFB125Q8N687 156 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 MRPL30Q8TCC3 161 aaKnown RBP-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 RMND5BQ96G75 393 aaPredicted RBP-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 DHRS9Q9BPW9 319 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 UTP11Q9Y3A2 253 aaKnown RBP-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 EPPK1P58107 5090 aaKnown RBP-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 MGAMO43451 1857 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 TNS3Q68CZ2 1445 aa-0.74□□□□□ -2.53
MIR548I3-201ENST00000408378 PTPRQQ9UMZ3 2332 aa-0.75□□□□□ -2.53
MIR548I3-201ENST00000408378 MAP1BP46821 2468 aaKnown RBP-0.75□□□□□ -2.53
MIR548I3-201ENST00000408378 HECTD4Q9Y4D8 3996 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms