RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 COX6CP09669 75 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 IFI6P09912 130 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 TMEM155Q4W5P6 130 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 MED13LQ71F56 2210 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 IGHV1-24A0A0C4DH33 117 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 K7ESF4 209 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 TIAF1O95411 115 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 SRSF7Q16629 238 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■□□□□ 8.6
SRPK1-204ENST00000373825 ZC2HC1BQ5TFG8 222 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 NCR2O95944 276 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 KIR3DL3Q8N743 410 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 SPTAN1Q13813 2472 aaKnown RBP12.79□□□□□ -0.36
SRPK1-204ENST00000373825 MED13Q9UHV7 2174 aa12.79□□□□□ -0.36
SRPK1-204ENST00000373825 NKX2-8O15522 239 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 SYNGR3O43761 229 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 IGHV4-39P01824 125 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 MORN2Q502X0 79 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 RAXQ9Y2V3 346 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 INSIG2Q9Y5U4 225 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 THSD7AQ9UPZ6 1657 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 TRAV24A0A0B4J272 114 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 LMO7DNF2Z398 122 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 MLNRO43193 412 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 AREGP15514 252 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 FCGR2BP31994 310 aaPredicted RBP12.78□□□□□ -0.36
SRPK1-204ENST00000373825 SPEM1Q8N4L4 309 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 IGHV3-72A0A0B4J1Y9 119 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 CD27P26842 260 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 TMEM92Q6UXU6 159 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 ZNF441Q8N8Z8 693 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 VCX2Q9H322 139 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 CGB1A6NKQ9 187 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 DYNLRB1Q9NP97 96 aa12.78□□□□□ -0.36
SRPK1-204ENST00000373825 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.36
SRPK1-204ENST00000373825 K7EN84 100 aa12.77□□□□□ -0.36
SRPK1-204ENST00000373825 ZNF296Q8WUU4 475 aaPredicted RBP12.77□□□□□ -0.36
SRPK1-204ENST00000373825 MRPL32Q9BYC8 188 aaKnown RBP12.77□□□□□ -0.36
SRPK1-204ENST00000373825 C3orf56Q8N813 242 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 TMEM178AQ8NBL3 297 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 SSC4DQ8WTU2 575 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 RLFQ13129 1914 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 LIFP15018 202 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 SRD5A2P31213 254 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 PRDX2P32119 198 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 DLX4Q92988 240 aaPredicted RBP12.77□□□□□ -0.37
SRPK1-204ENST00000373825 PKIBQ9C010 78 aa12.77□□□□□ -0.37
SRPK1-204ENST00000373825 EVI2AP22794 236 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 C10orf128Q5T292 105 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 HS3ST6Q96QI5 342 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 TSC2P49815 1807 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 PATJQ8NI35 1801 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 D6R8Y8 96 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 DPM2O94777 84 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 IGKCP01834 107 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 Q6ZS52 159 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 ZIC4Q8N9L1 334 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 EPDR1Q9UM22 224 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 IFI27P40305 119 aaPredicted RBP12.76□□□□□ -0.37
SRPK1-204ENST00000373825 C20orf204Q6ZNR8 217 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 RAB1CQ92928 201 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 F8W1H4 67 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 DLL1O00548 723 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 TMEM170BQ5T4T1 132 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 ATP5L2Q7Z4Y8 100 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 MDP1Q86V88 176 aa12.76□□□□□ -0.37
SRPK1-204ENST00000373825 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 GAGE7O76087 117 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 GAGE12FP0CL80 117 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 GAGE12GP0CL81 117 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 GAGE12IP0CL82 117 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 GAGE4Q13068 117 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 SRXN1Q9BYN0 137 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 CXXC4Q9H2H0 198 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 MPV17P39210 176 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 FAM168AQ92567 244 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 ALPK3Q96L96 1907 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 PLXNB1O43157 2135 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 CXCL10P02778 98 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 WNT2P09544 360 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 RNPS1Q15287 305 aaKnown RBP12.75□□□□□ -0.37
SRPK1-204ENST00000373825 ASCL2Q99929 193 aa12.75□□□□□ -0.37
SRPK1-204ENST00000373825 IFI27L2Q9H2X8 130 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 F2RL2O00254 374 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 MOGAT3Q86VF5 341 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 CIARTQ8N365 385 aaPredicted RBP12.74□□□□□ -0.37
SRPK1-204ENST00000373825 OR13A1Q8NGR1 328 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 LY96Q9Y6Y9 160 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 LPAL2Q16609 132 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 MED12LQ86YW9 2145 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 M0R1B8 84 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 EFNA2O43921 213 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 AGFG2O95081 481 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 SPINK14Q6IE38 97 aa12.74□□□□□ -0.37
SRPK1-204ENST00000373825 ETV2O00321 342 aaPredicted RBP12.73□□□□□ -0.37
SRPK1-204ENST00000373825 IGKV1-39P01597 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms