RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 C2orf16Q68DN1 1984 aa13.71□□□□□ -0.21
PHRF1-201ENST00000264555 ADCYAP1P18509 176 aa13.71□□□□□ -0.21
PHRF1-201ENST00000264555 TMEM136Q6ZRR5 245 aa13.71□□□□□ -0.21
PHRF1-201ENST00000264555 CENPVQ7Z7K6 275 aaPredicted RBP13.71□□□□□ -0.21
PHRF1-201ENST00000264555 ST6GALNAC3Q8NDV1 305 aa13.71□□□□□ -0.21
PHRF1-201ENST00000264555 GSN-AS1Q9NRJ2 163 aa13.71□□□□□ -0.21
PHRF1-201ENST00000264555 SNCGO76070 127 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 CXCL1P09341 107 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 TCF23Q7RTU1 214 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 PIP4P1Q86T03 277 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 CACNA1HO95180 2353 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 TRAV5A0A0B4J249 113 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 NUDT3O95989 172 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 SRSF9Q13242 221 aaKnown RBP eCLIP13.71□□□□□ -0.22
PHRF1-201ENST00000264555 TMEM70Q9BUB7 260 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 NCOR1P1Q9H4R4 102 aa13.71□□□□□ -0.22
PHRF1-201ENST00000264555 TPTE2P1Q5T6R2 138 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 SLC25A34Q6PIV7 304 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 KCNS1Q96KK3 526 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 WNT2P09544 360 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 ROS1P08922 2347 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 OR4C46A6NHA9 309 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 IGLV1-44P01699 117 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 C12orf54Q6X4T0 127 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 EFNA4P52798 201 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 FAM53AQ6NSI3 398 aaPredicted RBP13.7□□□□□ -0.22
PHRF1-201ENST00000264555 ZNF600Q6ZNG1 722 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 Q8TCH9 128 aa13.7□□□□□ -0.22
PHRF1-201ENST00000264555 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 RPRMLQ8N4K4 120 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 CRIM1Q9NZV1 1036 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
PHRF1-201ENST00000264555 OOSP1A8MZH6 123 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 FNDC10F2Z333 226 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 OBSL1O75147 1896 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 CEACAM8P31997 349 aaPredicted RBP13.69□□□□□ -0.22
PHRF1-201ENST00000264555 ADMP35318 185 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 C9JCJ5 164 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 CIDEAO60543 219 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 LYPD2Q6UXB3 125 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 PRELID3AQ96N28 172 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 MSRB2Q9Y3D2 182 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 MYOD1P15172 320 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 HINT1P49773 126 aaPredicted RBP13.69□□□□□ -0.22
PHRF1-201ENST00000264555 SPSB3Q6PJ21 355 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 REC114Q7Z4M0 266 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 Q8NFD4 153 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 TMEM190Q8WZ59 177 aa13.69□□□□□ -0.22
PHRF1-201ENST00000264555 BUB1B-PAK6H3BSN5 160 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 FOXL1Q12952 345 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 FAM159AQ6UWV7 190 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 TRGV9Q99603 122 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 GNB1LQ9BYB4 327 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 TRBV20OR9-2A0A075B6H5 130 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 C5orf52A6NGY3 159 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 K7ENP7 123 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 DLX1P56177 255 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 RHOGP84095 191 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 KIAA2026Q5HYC2 2103 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 E7EQL1 145 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 SERF1AO75920 110 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 TCTAP57738 103 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 MINOS1Q5TGZ0 78 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 ATOH7Q8N100 152 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 SLC50A1Q9BRV3 221 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 MINOS1-NBL1R4GNA1 71 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 M0R1W7 72 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 TDGF1P13385 188 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 AREGP15514 252 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 PAX9P55771 341 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 DDB2Q92466 427 aa13.68□□□□□ -0.22
PHRF1-201ENST00000264555 RNF224P0DH78 156 aa13.67□□□□□ -0.22
PHRF1-201ENST00000264555 TMEM50AO95807 157 aa13.67□□□□□ -0.22
PHRF1-201ENST00000264555 IGKV1-16P04430 117 aa13.67□□□□□ -0.22
PHRF1-201ENST00000264555 VMO1Q7Z5L0 202 aa13.67□□□□□ -0.22
PHRF1-201ENST00000264555 FER1L6-AS1Q8NA97 138 aa13.67□□□□□ -0.22
PHRF1-201ENST00000264555 RAX2Q96IS3 184 aa13.67□□□□□ -0.22
PHRF1-201ENST00000264555 SOD3P08294 240 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 PSG8Q9UQ74 426 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 Q6ZSR3 168 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 FER1L5A0AVI2 2057 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 A0A1B0GWJ7 208 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 APOHP02749 345 aaPredicted RBP13.66□□□□□ -0.22
PHRF1-201ENST00000264555 PSG1P11464 419 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 CFHR2P36980 270 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 DUX5Q96PT3 197 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 DERL1Q9BUN8 251 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 SIGLEC9Q9Y336 463 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 RNASE2P10153 161 aaKnown RBP13.66□□□□□ -0.22
PHRF1-201ENST00000264555 COL8A2P25067 703 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 SSC4DQ8WTU2 575 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 NEUROG1Q92886 237 aa13.66□□□□□ -0.22
PHRF1-201ENST00000264555 TGFAP01135 160 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 IGKV1-39P01597 117 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 IGKV1D-39P04432 117 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 TSKUQ8WUA8 353 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 F11RQ9Y624 299 aaKnown RBP13.65□□□□□ -0.22
PHRF1-201ENST00000264555 LY96Q9Y6Y9 160 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 LYPD6Q86Y78 171 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms