RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 APELAP0DMC3 54 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 TAS2R45P59539 299 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 PLGLAQ15195 96 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 PQLC2Q6ZP29 291 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 C16orf82Q7Z2V1 217 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 VMO1Q7Z5L0 202 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 MRPL32Q9BYC8 188 aaKnown RBP14.49□□□□□ -0.09
SMPD3-211ENST00000568373 ARL2-SNX15V9GYD0 113 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 FCN1O00602 326 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 MMDQ15546 238 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 SRSF12Q8WXF0 261 aaKnown RBP14.48□□□□□ -0.09
SMPD3-211ENST00000568373 ZNF503Q96F45 646 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 KLF2Q9Y5W3 355 aaPredicted RBP14.48□□□□□ -0.09
SMPD3-211ENST00000568373 ASH1LQ9NR48 2969 aaKnown RBP14.48□□□□□ -0.09
SMPD3-211ENST00000568373 WNK2Q9Y3S1 2297 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 SCO2A0A1W2PP80 73 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 CORTO00230 105 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 SELENOTP62341 195 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 ZNF90Q03938 601 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 C19orf35Q6ZS72 473 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 RNF2Q99496 336 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 SLC25A33Q9BSK2 321 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 DNAJC4Q9NNZ3 241 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 F11RQ9Y624 299 aaKnown RBP14.48□□□□□ -0.09
SMPD3-211ENST00000568373 FLNCQ14315 2725 aa14.48□□□□□ -0.09
SMPD3-211ENST00000568373 OR7C2O60412 319 aa14.47□□□□□ -0.09
SMPD3-211ENST00000568373 C8orf88P0DMB2 117 aa14.47□□□□□ -0.09
SMPD3-211ENST00000568373 LINC01551Q86U37 167 aa14.47□□□□□ -0.09
SMPD3-211ENST00000568373 SPTAN1Q13813 2472 aaKnown RBP14.47□□□□□ -0.09
SMPD3-211ENST00000568373 A0A1W2PRD5 423 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 A0A1W2PRF3 423 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 A0A1W2PRM7 423 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 H7BYZ3 331 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 NBR2O15453 112 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 MOSP00540 346 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 S100A6P06703 90 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 PAX2Q02962 417 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 PFDN5Q99471 154 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 SRSF8Q9BRL6 282 aaKnown RBP14.46□□□□□ -0.09
SMPD3-211ENST00000568373 TRBV24-1A0A075B6N3 115 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 OVOL3O00110 214 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 SNRPEP62304 92 aaKnown RBP14.46□□□□□ -0.09
SMPD3-211ENST00000568373 LCN2P80188 198 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 TMEM116Q8NCL8 245 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 NPBQ8NG41 125 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 OR1L4Q8NGR5 311 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 C22orf15Q8WYQ4 148 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 C11orf52Q96A22 123 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 ANAPC16Q96DE5 110 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 FAM210BQ96KR6 192 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 UHRF2Q96PU4 802 aa14.46□□□□□ -0.09
SMPD3-211ENST00000568373 MED13LQ71F56 2210 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 C5orf52A6NGY3 159 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 COX7A2P2O60397 106 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 NDUFA3O95167 84 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 HOXB4P17483 251 aaPredicted RBP14.45□□□□□ -0.1
SMPD3-211ENST00000568373 SSX2Q16385 188 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 RUSC1-AS1Q66K80 236 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 CCDC144NLQ6NUI1 221 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 ZNF843Q8N446 348 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 EAF1Q96JC9 268 aaPredicted RBP14.45□□□□□ -0.1
SMPD3-211ENST00000568373 SIRPDQ9H106 197 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 TNFRSF19Q9NS68 423 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 TRBV20OR9-2A0A075B6H5 130 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 BPIFB3P59826 476 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 MORN5Q5VZ52 161 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 OR4X1Q8NH49 305 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 IGFBPL1Q8WX77 278 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 FAM167A-AS1Q96KT0 104 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 BPESC1Q9GZL8 116 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 DMRT1Q9Y5R6 373 aa14.45□□□□□ -0.1
SMPD3-211ENST00000568373 IGHV2-70DA0A0C4DH43 119 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 OOSP1A8MZH6 123 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 CNIH1O95406 144 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 PFN1P07737 140 aaKnown RBP14.44□□□□□ -0.1
SMPD3-211ENST00000568373 CD24P25063 80 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 MINOS1Q5TGZ0 78 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 C10orf113Q5VZT2 155 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 TRGV9Q99603 122 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 SLC25A2Q9BXI2 301 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 MINOS1-NBL1R4GNA1 71 aa14.44□□□□□ -0.1
SMPD3-211ENST00000568373 OR10J4P0C629 311 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 PATE2Q6UY27 113 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 OR5T1Q8NG75 326 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 OR2T10Q8NGZ9 312 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 OR5B12Q96R08 314 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 CD99P14209 185 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 GALR1P47211 349 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 AKR1D1P51857 326 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 LMO4P61968 165 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 HES1Q14469 280 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 ZNF355PQ9NSJ1 428 aa14.43□□□□□ -0.1
SMPD3-211ENST00000568373 ABCA1O95477 2261 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 TRAV5A0A0B4J249 113 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 PGPEP1LA6NFU8 196 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 S100PP25815 95 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 LGALS4P56470 323 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 FBLN7Q53RD9 439 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 DYNAPQ8N1N2 210 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 NECAP1Q8NC96 275 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms