RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PBOV1Q9GZY1 135 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 SS18L2Q9UHA2 77 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 SLC35A3Q9Y2D2 325 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 SPTBN5Q9NRC6 3674 aaKnown RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 NBEAL2Q6ZNJ1 2754 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 PLXNB1O43157 2135 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 SHANK1Q9Y566 2161 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 ZNF106Q9H2Y7 1883 aaKnown RBP2.06□□□□□ -2.08
SQLE-204ENST00000520493 MYO16Q9Y6X6 1858 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 IGLV10-54A0A075B6I4 117 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 ODF3BA8MYP8 253 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 BUB1B-PAK6H3BSN5 160 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 CRHP06850 196 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 ZNF80P51504 273 aaPredicted RBP2.06□□□□□ -2.08
SQLE-204ENST00000520493 PIGPP57054 158 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 CDC42P60953 191 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 Q6ZS52 159 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 LCA10Q71F78 164 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 ZNF767PQ75MW2 155 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 LINC00304Q8N9R0 145 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 OR5C1Q8NGR4 320 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 OR5J2Q8NH18 312 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 MALSU1Q96EH3 234 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 IMMP2LQ96T52 175 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 SERPINI1Q99574 410 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 PBDC1Q9BVG4 233 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 C19orf12Q9NSK7 152 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 TIMM22Q9Y584 194 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 PLXND1Q9Y4D7 1925 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 VWFP04275 2813 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 TOPBP1Q92547 1522 aa2.06□□□□□ -2.08
SQLE-204ENST00000520493 WDR90Q96KV7 1748 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 MYH11P35749 1972 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 SCN9AQ15858 1988 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 REV3LO60673 3130 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 HIVEP2P31629 2446 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 TRAV7A0A075B6U4 112 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 TRAV41A0A0B4J266 112 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 A0A1W2PNN7 141 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 BPGMP07738 259 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 CTSGP08311 255 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 S100A4P26447 101 aaKnown RBP2.05□□□□□ -2.08
SQLE-204ENST00000520493 RPL28P46779 137 aaKnown RBP2.05□□□□□ -2.08
SQLE-204ENST00000520493 EVX1P49640 407 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 YPEL3P61236 119 aaPredicted RBP2.05□□□□□ -2.08
SQLE-204ENST00000520493 FOXF1Q12946 379 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 TMEM78Q5T7P6 136 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 C10orf126Q8N4M7 172 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 RPP25LQ8N5L8 163 aaKnown RBP2.05□□□□□ -2.08
SQLE-204ENST00000520493 TERB2Q8NHR7 220 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 LYSMD1Q96S90 227 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 TUBA4BQ9H853 241 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 SLC39A9Q9NUM3 307 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 MED29Q9NX70 200 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 HHLA3Q9XRX5 114 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 ERGIC3Q9Y282 383 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 AMMECR1Q9Y4X0 333 aaPredicted RBP2.05□□□□□ -2.08
SQLE-204ENST00000520493 TIMM9Q9Y5J7 89 aa2.05□□□□□ -2.08
SQLE-204ENST00000520493 MUC21A0A0G2JKD1 596 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 MUC21A0A140T8X8 626 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 CLDN25C9JDP6 229 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 TRAPPC2LH3BP13 241 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 H3BT86 120 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 SLC22A1O15245 554 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 ZNF73O43830 326 aaPredicted RBP2.04□□□□□ -2.08
SQLE-204ENST00000520493 ORC5O43913 435 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 PFDN1O60925 122 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 APOA2P02652 100 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 NBEAP1P0C6P0 100 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 CCR2P41597 374 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 RHEBQ15382 184 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 ALX1Q15699 326 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 IQSEC2Q5JU85 1478 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 UHRF1BP1Q6BDS2 1440 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 MIR17HGQ75NE6 70 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 SLC35E3Q7Z769 313 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 TRAPPC6BQ86SZ2 158 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 UBR2Q8IWV8 1755 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 Q8NDZ9 215 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 NUP35Q8NFH5 326 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 PLEKHB2Q96CS7 222 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 DNHD1Q96M86 4753 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 SCGB3A1Q96QR1 104 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 BAZ1AQ9NRL2 1556 aaPredicted RBP2.04□□□□□ -2.08
SQLE-204ENST00000520493 NAT8Q9UHE5 227 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 NDUFAF1Q9Y375 327 aa2.04□□□□□ -2.08
SQLE-204ENST00000520493 KDM5CP41229 1560 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 SLIT2O94813 1529 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 IGHV3-64A0A075B6Q5 118 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 MAP1LC3B2A6NCE7 125 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 H7C2G1 150 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 PIAS1O75925 651 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 FXYD2P54710 66 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 DEFA3P59666 94 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 ZNF90Q03938 601 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 RRN3P1Q2M238 152 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 LINC01554Q52M75 96 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 AGTRAPQ6RW13 159 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 EXOC3-AS1Q8N2X6 119 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms