RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 IGHV3-48P01763 117 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 IFNA4P05014 189 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 DEFA4P12838 97 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 HIST1H1BP16401 226 aaKnown RBP4.62□□□□□ -1.67
USP39-213ENST00000467885 NPY1RP25929 384 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 CAV2P51636 162 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 NKX2-5P52952 324 aaPredicted RBP4.62□□□□□ -1.67
USP39-213ENST00000467885 PROK1P58294 105 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 RAB11AP62491 216 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 CD69Q07108 199 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 OR2F1Q13607 317 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ATP6V1FQ16864 119 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ECSCRQ19T08 205 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 VWC2Q2TAL6 325 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ZFP69Q49AA0 526 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 LCNL1Q6ZST4 164 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 TMUB2Q71RG4 321 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 LURAP1LQ8IV03 231 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 MRPL41Q8IXM3 137 aaKnown RBP4.62□□□□□ -1.67
USP39-213ENST00000467885 C9orf62Q8N4C0 152 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 TMEM217Q8N7C4 229 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ZNF491Q8N8L2 437 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 INO80EQ8NBZ0 244 aaPredicted RBP4.62□□□□□ -1.67
USP39-213ENST00000467885 TMEM116Q8NCL8 245 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 OR5AU1Q8NGC0 362 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 OR10P1Q8NGE3 313 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 MYOZ3Q8TDC0 251 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ABHD5Q8WTS1 349 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 SCARB1Q8WTV0 552 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 DCUN1D4Q92564 292 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ZNF414Q96IQ9 312 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 CLUHP3Q96NS8 147 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 GGACTQ9BVM4 153 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 GON7Q9BXV9 100 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 NPVFQ9HCQ7 196 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 FBXL7Q9UJT9 491 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 HSPB11Q9Y547 144 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ZFHX3Q15911 3703 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 IGHV3-21A0A0B4J1V1 117 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 PSMB11A5LHX3 300 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 FNDC10F2Z333 226 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 H3BUA1 57 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 BOLA2-SMG1P6H3BVE0 249 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 CLEC3BP05452 202 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 ELANEP08246 267 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 CTSGP08311 255 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 PET100P0DJ07 73 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 AP2S1P53680 142 aaPredicted RBP4.61□□□□□ -1.67
USP39-213ENST00000467885 DLK1P80370 383 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 RHOGP84095 191 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 ATP5G2Q06055 141 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 BAXQ07812 192 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 FOXE3Q13461 319 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 OR8G2PQ6IF36 304 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 ZNF343Q6P1L6 599 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 TEX38Q6PEX7 206 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 TMEM182Q6ZP80 229 aaPredicted RBP4.61□□□□□ -1.67
USP39-213ENST00000467885 REC114Q7Z4M0 266 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 KLHDC1Q8N7A1 406 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 NECAP1Q8NC96 275 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 OR5C1Q8NGR4 320 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 OR4F5Q8NH21 305 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 VN1R17PQ8TDU5 208 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 NPIPB3Q92617 1050 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 MISP3Q96FF7 219 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 USMG5Q96IX5 58 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 ARV1Q9H2C2 271 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 RFNGQ9Y644 331 aa4.61□□□□□ -1.67
USP39-213ENST00000467885 TEP1Q99973 2627 aaKnown RBP4.61□□□□□ -1.67
USP39-213ENST00000467885 IGKV1D-37A0A075B6S9 117 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 MFSD2BA6NFX1 497 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 CORTO00230 105 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 TAAR5O14804 337 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 TRGV3P03979 118 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 HNRNPCP07910 306 aaKnown RBP eCLIP4.6□□□□□ -1.67
USP39-213ENST00000467885 OR8U8P0C7N1 319 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 LINC00869P0C866 280 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 PF4V1P10720 104 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 CD28P10747 220 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 FCGR2BP31994 310 aaPredicted RBP4.6□□□□□ -1.67
USP39-213ENST00000467885 ADMP35318 185 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 NUP62P37198 522 aaPredicted RBP4.6□□□□□ -1.67
USP39-213ENST00000467885 CDX1P47902 265 aaPredicted RBP4.6□□□□□ -1.67
USP39-213ENST00000467885 MFAP4P55083 255 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 SLC38A11Q08AI6 406 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 ZNF345Q14585 488 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 OPCMLQ14982 345 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 KRTAP24-1Q3LI83 254 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 RPL7L1Q6DKI1 246 aaKnown RBP4.6□□□□□ -1.67
USP39-213ENST00000467885 HIST2H2BDQ6DRA6 164 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 TMEM144Q7Z5S9 345 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 COMMD1Q8N668 190 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.6□□□□□ -1.67
USP39-213ENST00000467885 THAP8Q8NA92 274 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 OR1S2Q8NGQ3 325 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 OR4X1Q8NH49 305 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 ZNF502Q8TBZ5 544 aa4.6□□□□□ -1.67
USP39-213ENST00000467885 PINX1Q96BK5 328 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms