RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 OR5J2Q8NH18 312 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 WFDC5Q8TCV5 224 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 PLEKHB2Q96CS7 222 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 SLAMF6Q96DU3 332 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 RMND5BQ96G75 393 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 SCGB3A1Q96QR1 104 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 TMEM133Q9H2Q1 129 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 OSTCQ9NRP0 149 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 MED11Q9P086 117 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 PCTPQ9UKL6 214 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 RIMBP3CA6NJZ7 1639 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 RIMBP3BA6NNM3 1639 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 RIMBP3Q9UFD9 1639 aa2.59□□□□□ -1.99
HMGB1P26-201ENST00000452520 SHROOM3Q8TF72 1996 aa2.59□□□□□ -2
HMGB1P26-201ENST00000452520 MAST2Q6P0Q8 1798 aa2.59□□□□□ -2
HMGB1P26-201ENST00000452520 FMN1Q68DA7 1419 aa2.59□□□□□ -2
HMGB1P26-201ENST00000452520 YTHDC2Q9H6S0 1430 aaKnown RBP2.59□□□□□ -2
HMGB1P26-201ENST00000452520 NYNRINQ9P2P1 1898 aaKnown RBP2.58□□□□□ -2
HMGB1P26-201ENST00000452520 MYH3P11055 1940 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 REREQ9P2R6 1566 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 IGKV2-24A0A0C4DH68 120 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 A0A0D9SEW6 157 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 TAX1BP3O14907 124 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 APOA2P02652 100 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 ARPC4P59998 168 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 YPEL3P61236 119 aaPredicted RBP2.58□□□□□ -2
HMGB1P26-201ENST00000452520 TRAPPC6BQ86SZ2 158 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 HIST3H2BBQ8N257 126 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 DCANP1Q8TF63 244 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 DNAJC30Q96LL9 226 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
HMGB1P26-201ENST00000452520 ZNF106Q9H2Y7 1883 aaKnown RBP2.57□□□□□ -2
HMGB1P26-201ENST00000452520 PFDN1O60925 122 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 IFNA14P01570 189 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 CSRP1P21291 193 aaKnown RBP2.57□□□□□ -2
HMGB1P26-201ENST00000452520 PABPC1L2AQ5JQF8 200 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 NUP35Q8NFH5 326 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 OR10J5Q8NHC4 309 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 PFN4Q8NHR9 129 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 TMEM106AQ96A25 262 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 ADAT3Q96EY9 351 aaPredicted RBP2.57□□□□□ -2
HMGB1P26-201ENST00000452520 GINS4Q9BRT9 223 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 EFCAB11Q9BUY7 163 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 GINS2Q9Y248 185 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 CCL26Q9Y258 94 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 SCN9AQ15858 1988 aa2.57□□□□□ -2
HMGB1P26-201ENST00000452520 MYH2Q9UKX2 1941 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 A0A087X0T9 212 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 IGHV1-18A0A0C4DH31 117 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 MUC21A0A0G2JKD1 596 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 MUC21A0A140T8X8 626 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 PRORSD1PA6NEY8 169 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 M0R378 163 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 NFYBP25208 207 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 EIF5AP63241 154 aaKnown RBP2.56□□□□□ -2
HMGB1P26-201ENST00000452520 MBD3L1Q8WWY6 194 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 TVP23CQ96ET8 276 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 CCDC32Q9BV29 185 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 OR2J1Q9GZK6 312 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 CKLFQ9UBR5 152 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 HSPB11Q9Y547 144 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 TONSLQ96HA7 1378 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 ARHGEF11O15085 1522 aa2.56□□□□□ -2
HMGB1P26-201ENST00000452520 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 IGHV3-64A0A075B6Q5 118 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 IGKV1-9A0A0C4DH69 117 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 A0A1B0GVG6 124 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 RFPL4AA6NLU0 287 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 E7EQ34 232 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 RFPL4AL1F8VTS6 287 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 C19orf84I3L1E1 186 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 KIF1BO60333 1816 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 OGNP20774 298 aaKnown RBP2.55□□□□□ -2
HMGB1P26-201ENST00000452520 NFYAP23511 347 aaPredicted RBP2.55□□□□□ -2
HMGB1P26-201ENST00000452520 MYH11P35749 1972 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 SRP14P37108 136 aaKnown RBP2.55□□□□□ -2
HMGB1P26-201ENST00000452520 EMP1P54849 157 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 SURF2Q15527 256 aaPredicted RBP2.55□□□□□ -2
HMGB1P26-201ENST00000452520 SDK2Q58EX2 2172 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 FAM27BQ5VT28 67 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 SIGLECL1Q8N7X8 197 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 ST6GALNAC3Q8NDV1 305 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 CARD19Q96LW7 228 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 LRTM1Q9HBL6 345 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 BAZ1AQ9NRL2 1556 aaPredicted RBP2.55□□□□□ -2
HMGB1P26-201ENST00000452520 PLXND1Q9Y4D7 1925 aa2.55□□□□□ -2
HMGB1P26-201ENST00000452520 HEATR5AQ86XA9 2040 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 TRBV10-2A0A0K0K1G8 114 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 SDHAF1A6NFY7 115 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 INSL3P51460 131 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 FXYD2P54710 66 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 ZNF90Q03938 601 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 ZNF791Q3KP31 576 aaPredicted RBP2.54□□□□□ -2
HMGB1P26-201ENST00000452520 SAMD13Q5VXD3 122 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 TOMM20LQ6UXN7 152 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 TMEM35BQ8NCS4 154 aa2.54□□□□□ -2
HMGB1P26-201ENST00000452520 OR4X2Q8NGF9 303 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms