RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ZNF843Q8N446 348 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 CTDSP1Q9GZU7 261 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 DNAJC4Q9NNZ3 241 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 MLXQ9UH92 298 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 ACACBO00763 2458 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 FCN1O00602 326 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 COX7A2P2O60397 106 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 FAM106CPP0CH98 169 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 ATP5J2P56134 94 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 UBE2G2P60604 165 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 SSBP2P81877 361 aaPredicted RBP12.49□□□□□ -0.41
SNX13-204ENST00000444712 ZNF674Q2M3X9 581 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 SPATA31B1PQ5VZV4 182 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 MIR17HGQ75NE6 70 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 Q8N6K4 173 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 HIST1H2BAQ96A08 127 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 UHRF2Q96PU4 802 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 SLC25A33Q9BSK2 321 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 ELOA3CA0A087WX78 387 aaPredicted RBP12.49□□□□□ -0.41
SNX13-204ENST00000444712 VWC2LB2RUY7 222 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 PRB1P04280 392 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 TMEM11P17152 192 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 MFAP2P55001 183 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 DSCR9P59020 149 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 FXYD3Q14802 87 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 BBC3Q96PG8 261 aaPredicted RBP12.49□□□□□ -0.41
SNX13-204ENST00000444712 TNFRSF19Q9NS68 423 aa12.49□□□□□ -0.41
SNX13-204ENST00000444712 NAV3Q8IVL0 2385 aa12.48□□□□□ -0.41
SNX13-204ENST00000444712 IGKV1D-37A0A075B6S9 117 aa12.48□□□□□ -0.41
SNX13-204ENST00000444712 CTRB1P17538 263 aa12.48□□□□□ -0.41
SNX13-204ENST00000444712 GATA2P23769 480 aaPredicted RBP12.48□□□□□ -0.41
SNX13-204ENST00000444712 CTRB2Q6GPI1 263 aa12.48□□□□□ -0.41
SNX13-204ENST00000444712 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
SNX13-204ENST00000444712 LRBAP50851 2863 aa12.48□□□□□ -0.41
SNX13-204ENST00000444712 PLXNB1O43157 2135 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 PSMB11A5LHX3 300 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 ATP5G3P48201 142 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 C10orf113Q5VZT2 155 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 ISOC2Q96AB3 205 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 WNT10AQ9GZT5 417 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 DOK5Q9P104 306 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 NCBP2LA6PVI3 153 aaKnown RBP12.47□□□□□ -0.41
SNX13-204ENST00000444712 CLDN34H7C241 214 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 OR7C2O60412 319 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 FABP1P07148 127 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 RNF224P0DH78 156 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 COX6B1P14854 86 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 PAX8Q06710 450 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 ADIRFQ15847 76 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 DYNAPQ8N1N2 210 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 OR4X1Q8NH49 305 aa12.47□□□□□ -0.41
SNX13-204ENST00000444712 NPIPB5A8MRT5 1133 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 NPFFO15130 113 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 CRYBA1P05813 215 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 APELAP0DMC3 54 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 PAX1P15863 534 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 SAA4P35542 130 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 FAM24BQ8N5W8 94 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 ARPC1AQ92747 370 aa12.46□□□□□ -0.41
SNX13-204ENST00000444712 CACNA1BQ00975 2339 aa12.46□□□□□ -0.42
SNX13-204ENST00000444712 CD24P25063 80 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 RAB5BP61020 215 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
SNX13-204ENST00000444712 STXBP6Q8NFX7 210 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 PERPQ96FX8 193 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 MRPL36Q9P0J6 103 aaKnown RBP12.45□□□□□ -0.42
SNX13-204ENST00000444712 IGSF10Q6WRI0 2623 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 C1orf196B1AJZ1 125 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 I3L2K1 104 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 RAB5AP20339 215 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 ZNF90Q03938 601 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 C11orf52Q96A22 123 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 ANAPC16Q96DE5 110 aa12.45□□□□□ -0.42
SNX13-204ENST00000444712 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
SNX13-204ENST00000444712 IGHV4-61A0A0C4DH41 118 aa12.44□□□□□ -0.42
SNX13-204ENST00000444712 IGHV3-48P01763 117 aa12.44□□□□□ -0.42
SNX13-204ENST00000444712 PLP1P60201 277 aa12.44□□□□□ -0.42
SNX13-204ENST00000444712 YPEL4Q96NS1 127 aa12.44□□□□□ -0.42
SNX13-204ENST00000444712 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
SNX13-204ENST00000444712 NDUFB4O95168 129 aa12.44□□□□□ -0.42
SNX13-204ENST00000444712 CX3CL1P78423 397 aa12.44□□□□□ -0.42
SNX13-204ENST00000444712 DOPEY1Q5JWR5 2465 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 CENPVL3A0A0U1RRI6 287 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 HLA-DRB1P01911 266 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 NPPCP23582 126 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 KIAA0141Q14154 515 aaPredicted RBP12.43□□□□□ -0.42
SNX13-204ENST00000444712 TTC9CQ8N5M4 171 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 OR5AU1Q8NGC0 362 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 OR51G1Q8NGK1 321 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 RASL11BQ9BPW5 248 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 SLC25A2Q9BXI2 301 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 THYN1Q9P016 225 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 DMRT1Q9Y5R6 373 aa12.43□□□□□ -0.42
SNX13-204ENST00000444712 CD99P14209 185 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 UBE2L3P68036 154 aaKnown RBP12.42□□□□□ -0.42
SNX13-204ENST00000444712 ELOBQ15370 118 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms