RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 NPPCP23582 126 aa16.51■□□□□ 0.23
USP39-203ENST00000409470 TAS2R45P59539 299 aa16.51■□□□□ 0.23
USP39-203ENST00000409470 ZNF90Q03938 601 aa16.51■□□□□ 0.23
USP39-203ENST00000409470 DYNAPQ8N1N2 210 aa16.51■□□□□ 0.23
USP39-203ENST00000409470 YTHDF2Q9Y5A9 579 aaKnown RBP16.51■□□□□ 0.23
USP39-203ENST00000409470 WNK2Q9Y3S1 2297 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 IGKV1D-37A0A075B6S9 117 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 ZFP82Q8N141 532 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 TMEM37Q8WXS4 190 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 YPEL4Q96NS1 127 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 URGCP-MRPS24S4R325 110 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 IGHV3-21A0A0B4J1V1 117 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 OR7C2O60412 319 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 NDUFA3O95167 84 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 CRYGCP07315 174 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 SELENOTP62341 195 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 RPL23P62829 140 aaKnown RBP16.5■□□□□ 0.23
USP39-203ENST00000409470 ZNF343Q6P1L6 599 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 RNF2Q99496 336 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 SRSF8Q9BRL6 282 aaKnown RBP16.5■□□□□ 0.23
USP39-203ENST00000409470 DNAJC4Q9NNZ3 241 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 DOK5Q9P104 306 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 USP24Q9UPU5 2620 aa16.5■□□□□ 0.23
USP39-203ENST00000409470 C1orf196B1AJZ1 125 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 COX7A2P2O60397 106 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 NDUFB4O95168 129 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 TBX15Q96SF7 602 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 MRPL32Q9BYC8 188 aaKnown RBP16.49■□□□□ 0.23
USP39-203ENST00000409470 LPAR2Q9HBW0 351 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 TMEM167BQ9NRX6 74 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 TNFRSF19Q9NS68 423 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 PRELID1Q9Y255 219 aa16.49■□□□□ 0.23
USP39-203ENST00000409470 MED13LQ71F56 2210 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 RAB5BP61020 215 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 FXYD3Q14802 87 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 FBLN7Q53RD9 439 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 PQLC2Q6ZP29 291 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 OR1L4Q8NGR5 311 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 OR4X1Q8NH49 305 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 PFDN5Q99471 154 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 PIMREGQ9BSJ6 248 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 TMEM242Q9NWH2 141 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 CLDN34H7C241 214 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 C8orf88P0DMB2 117 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 UBE2E1P51965 193 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 ELOBQ15370 118 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 C5orf64Q2M2E5 130 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 RUSC1-AS1Q66K80 236 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 FAM168AQ92567 244 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 CTDSP1Q9GZU7 261 aa16.48■□□□□ 0.23
USP39-203ENST00000409470 TBL2Q9Y4P3 447 aaKnown RBP16.48■□□□□ 0.23
USP39-203ENST00000409470 DOPEY1Q5JWR5 2465 aa16.47■□□□□ 0.23
USP39-203ENST00000409470 PSMB11A5LHX3 300 aa16.47■□□□□ 0.23
USP39-203ENST00000409470 NCBP2LA6PVI3 153 aaKnown RBP16.47■□□□□ 0.23
USP39-203ENST00000409470 BPIFB3P59826 476 aa16.47■□□□□ 0.23
USP39-203ENST00000409470 C10orf113Q5VZT2 155 aa16.47■□□□□ 0.23
USP39-203ENST00000409470 C2CD4CQ8TF44 421 aa16.47■□□□□ 0.23
USP39-203ENST00000409470 Q8WTZ3 238 aa16.47■□□□□ 0.23
USP39-203ENST00000409470 BBC3Q96PG8 261 aaPredicted RBP16.47■□□□□ 0.23
USP39-203ENST00000409470 WNT10AQ9GZT5 417 aa16.47■□□□□ 0.23
USP39-203ENST00000409470 SCO2A0A1W2PP80 73 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 TMEM116Q8NCL8 245 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 SPOCK3Q9BQ16 436 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 DERL1Q9BUN8 251 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 DMRT1Q9Y5R6 373 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 KLF2Q9Y5W3 355 aaPredicted RBP16.46■□□□□ 0.23
USP39-203ENST00000409470 ZNF503Q96F45 646 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 UHRF2Q96PU4 802 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 TRGV9Q99603 122 aa16.46■□□□□ 0.23
USP39-203ENST00000409470 FAM103A1Q9BTL3 118 aaKnown RBP16.46■□□□□ 0.23
USP39-203ENST00000409470 OR10J4P0C629 311 aa16.45■□□□□ 0.22
USP39-203ENST00000409470 TMEM11P17152 192 aa16.45■□□□□ 0.22
USP39-203ENST00000409470 OR5T1Q8NG75 326 aa16.45■□□□□ 0.22
USP39-203ENST00000409470 MALSU1Q96EH3 234 aa16.45■□□□□ 0.22
USP39-203ENST00000409470 TRAV5A0A0B4J249 113 aa16.45■□□□□ 0.22
USP39-203ENST00000409470 MORN5Q5VZ52 161 aa16.45■□□□□ 0.22
USP39-203ENST00000409470 ARL2-SNX15V9GYD0 113 aa16.45■□□□□ 0.22
USP39-203ENST00000409470 TGIF2-C20orf24A0A0A6YYL0 155 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 TSPAN9O75954 239 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 CXCL1P09341 107 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 CTRB1P17538 263 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 ATP5J2P56134 94 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 CTRB2Q6GPI1 263 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 C16orf82Q7Z2V1 217 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 SSX3Q99909 188 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 SLC25A2Q9BXI2 301 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 SAV1Q9H4B6 383 aaPredicted RBP16.44■□□□□ 0.22
USP39-203ENST00000409470 COL12A1Q99715 3063 aa16.44■□□□□ 0.22
USP39-203ENST00000409470 ORM2P19652 201 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 RPS10P46783 165 aaKnown RBP16.43■□□□□ 0.22
USP39-203ENST00000409470 EBI3Q14213 229 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 CLEC2AQ6UVW9 174 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 PATE2Q6UY27 113 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 Q8N6K4 173 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 OR5AU1Q8NGC0 362 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 ZNF355PQ9NSJ1 428 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 FLNCQ14315 2725 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 FAM106CPP0CH98 169 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 SAA4P35542 130 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 C10orf105Q8TEF2 133 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms