RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 LCNL1Q6ZST4 164 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 VN1R4Q7Z5H5 301 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 GKN2Q86XP6 184 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 C11orf53Q8IXP5 236 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 ZIC4Q8N9L1 334 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 NUP37Q8NFH4 326 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 OR4B1Q8NGF8 309 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 JOSD2Q8TAC2 188 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 PSMF1Q92530 271 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 ZNF501Q96CX3 271 aaPredicted RBP5.13□□□□□ -1.59
SMCO1-201ENST00000397537 ANAPC13Q9BS18 74 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 SFXN3Q9BWM7 321 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 HES4Q9HCC6 221 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 CACFD1Q9UGQ2 172 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 F11RQ9Y624 299 aaKnown RBP5.13□□□□□ -1.59
SMCO1-201ENST00000397537 ENPP4Q9Y6X5 453 aa5.13□□□□□ -1.59
SMCO1-201ENST00000397537 TTC3P53804 2025 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 LAMA1P25391 3075 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 IGKV1-27A0A075B6S5 117 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 A0A087WWC5 75 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 SPAARA0A1B0GVQ0 90 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 SHISA9B4DS77 424 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 UPK2O00526 184 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 KBTBD11O94819 623 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 IGHG2P01859 326 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 SFTA3P0C7M3 94 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 IGHV3-43DP0DP04 118 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 CPMP14384 443 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 RPL7P18124 248 aaKnown RBP5.12□□□□□ -1.59
SMCO1-201ENST00000397537 EVI2AP22794 236 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 GABRA3P34903 492 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 THBS3P49746 956 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 GFERP55789 205 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 TAS2R20P59543 309 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 CYCSP99999 105 aaKnown RBP5.12□□□□□ -1.59
SMCO1-201ENST00000397537 LY6DQ14210 128 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 ZNF440Q8IYI8 595 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 OR2G3Q8NGZ4 309 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 NTN5Q8WTR8 489 aaPredicted RBP5.12□□□□□ -1.59
SMCO1-201ENST00000397537 SLC25A44Q96H78 314 aaPredicted RBP5.12□□□□□ -1.59
SMCO1-201ENST00000397537 YPEL4Q96NS1 127 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 RPS6KB2Q9UBS0 482 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 WASHC3Q9Y3C0 194 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 PTPRQQ9UMZ3 2332 aa5.12□□□□□ -1.59
SMCO1-201ENST00000397537 CELSR3Q9NYQ7 3312 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 IGHV4-30-2A0A087WSY4 118 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 LOC102724200A0A096LPH7 203 aaPredicted RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 TMEM235A6NFC5 223 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 GGT3PA6NGU5 568 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 H7BYZ3 331 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 M0R2Z0 102 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 TRAF3IP2O43734 574 aaPredicted RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 DUS4LO95620 317 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 SMIM10L2AP0DMW4 78 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 SMIM10L2BP0DMW5 78 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 IL15RAQ13261 267 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 RBMY1FQ15415 496 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 Q6ZSR6 202 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 ZNF627Q7L945 461 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 FAM19A3Q7Z5A8 133 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 PRNTQ86SH4 94 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 TMEM61Q8N0U2 210 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 SLC25A45Q8N413 288 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 DDB2Q92466 427 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 NEURL3Q96EH8 262 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 ATG5Q9H1Y0 275 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 BANF2Q9H503 90 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 RELNP78509 3460 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 URB1O60287 2271 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 DOPEY2Q9Y3R5 2298 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 A0A1B0GV50 99 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 SMIM1B2RUZ4 78 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 ORM2P19652 201 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 CSRP1P21291 193 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 RPS25P62851 125 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 TNFAIP6P98066 277 aaPredicted RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 MEF2BQ02080 365 aaPredicted RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 DAZ2Q13117 558 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 PAFAH1B3Q15102 231 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 IGFL4Q6B9Z1 124 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 H2AFVQ71UI9 128 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 DAZ4Q86SG3 579 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 ZNF675Q8TD23 568 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 THEM6Q8WUY1 208 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 TSLPQ969D9 159 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 C8orf49Q96NF6 230 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 VAMP8Q9BV40 100 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 C1QTNF4Q9BXJ3 329 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 DAZ1Q9NQZ3 744 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 DAZ3Q9NR90 486 aaKnown RBP5.11□□□□□ -1.59
SMCO1-201ENST00000397537 CCL28Q9NRJ3 127 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 CYSLTR1Q9Y271 337 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 INSIG2Q9Y5U4 225 aa5.11□□□□□ -1.59
SMCO1-201ENST00000397537 SDK1Q7Z5N4 2213 aa5.1□□□□□ -1.59
SMCO1-201ENST00000397537 IGHV6-1A0A0B4J1U7 121 aa5.1□□□□□ -1.59
SMCO1-201ENST00000397537 IGHV7-81A0A0B4J1V7 117 aa5.1□□□□□ -1.59
SMCO1-201ENST00000397537 IGHV3-16A0A0C4DH30 117 aa5.1□□□□□ -1.59
SMCO1-201ENST00000397537 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
SMCO1-201ENST00000397537 H7C1C5 153 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms