RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 PPIAL4CA0A0B4J2A2 164 aa17.33■□□□□ 0.37
TRIM54-202ENST00000380075 SCO2A0A1W2PP80 73 aa17.33■□□□□ 0.37
TRIM54-202ENST00000380075 E7EUB6 86 aa17.33■□□□□ 0.37
TRIM54-202ENST00000380075 PHOX2AO14813 284 aa17.33■□□□□ 0.37
TRIM54-202ENST00000380075 PPIAL4GP0DN37 164 aa17.33■□□□□ 0.37
TRIM54-202ENST00000380075 KRTAP10-9P60411 292 aa17.33■□□□□ 0.37
TRIM54-202ENST00000380075 CSMD2Q7Z408 3487 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 LYNX1G3V0Z9 82 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 FOXH1O75593 365 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 TYMSP04818 313 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 TRGC1P0CF51 173 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 LYNX1P0DP58 116 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 FAM3BP58499 235 aaPredicted RBP17.33■□□□□ 0.36
TRIM54-202ENST00000380075 LCN2P80188 198 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 SSX2Q16385 188 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 NECAP1Q8NC96 275 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 FRZBQ92765 325 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 DERL1Q9BUN8 251 aa17.33■□□□□ 0.36
TRIM54-202ENST00000380075 C9JCJ5 164 aa17.32■□□□□ 0.36
TRIM54-202ENST00000380075 BUB1B-PAK6H3BSN5 160 aa17.32■□□□□ 0.36
TRIM54-202ENST00000380075 ENSAO43768 121 aaKnown RBP17.32■□□□□ 0.36
TRIM54-202ENST00000380075 ACTL6BO94805 426 aa17.32■□□□□ 0.36
TRIM54-202ENST00000380075 ETFRF1Q6IPR1 90 aa17.32■□□□□ 0.36
TRIM54-202ENST00000380075 OR2T10Q8NGZ9 312 aa17.32■□□□□ 0.36
TRIM54-202ENST00000380075 CBLN4Q9NTU7 201 aa17.32■□□□□ 0.36
TRIM54-202ENST00000380075 INSIG2Q9Y5U4 225 aa17.32■□□□□ 0.36
TRIM54-202ENST00000380075 PSG5Q15238 335 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 PVRIGQ6DKI7 326 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 ZNF114Q8NC26 417 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 TIMD4Q96H15 378 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 IGHV1-3A0A0C4DH29 117 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 MDFIC2A0A1B0GVS7 189 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 CRYGBP07316 175 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 C8orf88P0DMB2 117 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 SELENOTP62341 195 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 PRSS8Q16651 343 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 MLANAQ16655 118 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 MRGPRG-AS1Q2M3A8 158 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 C10orf55Q5SWW7 151 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 THAP8Q8NA92 274 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 ACY3Q96HD9 319 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 PFDN5Q99471 154 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 RNF5Q99942 180 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 UBTD1Q9HAC8 227 aa17.31■□□□□ 0.36
TRIM54-202ENST00000380075 A0A1W2PPI3 338 aa17.3■□□□□ 0.36
TRIM54-202ENST00000380075 LIPFP07098 398 aa17.3■□□□□ 0.36
TRIM54-202ENST00000380075 LY6G5BQ8NDX9 201 aa17.3■□□□□ 0.36
TRIM54-202ENST00000380075 OR1L4Q8NGR5 311 aa17.3■□□□□ 0.36
TRIM54-202ENST00000380075 NEU4Q8WWR8 484 aaPredicted RBP17.3■□□□□ 0.36
TRIM54-202ENST00000380075 NRGNQ92686 78 aa17.3■□□□□ 0.36
TRIM54-202ENST00000380075 SFRP2Q96HF1 295 aa17.3■□□□□ 0.36
TRIM54-202ENST00000380075 SLC25A33Q9BSK2 321 aa17.3■□□□□ 0.36
TRIM54-202ENST00000380075 PCP4L1A6NKN8 68 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 OR5T1Q8NG75 326 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 OR2T6Q8NHC8 308 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 ELOVL1Q9BW60 279 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 ABCA12Q86UK0 2595 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 APCP25054 2843 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 TRBV20OR9-2A0A075B6H5 130 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 A0A1W2PPQ1 181 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 TCRBV4S1A1TA0A5B7 111 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 PSMB11A5LHX3 300 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 RPL27AP46776 148 aaKnown RBP17.29■□□□□ 0.36
TRIM54-202ENST00000380075 FOXL1Q12952 345 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 RPEQ96AT9 228 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 FNDC4Q9H6D8 234 aaPredicted RBP17.29■□□□□ 0.36
TRIM54-202ENST00000380075 DNAJC4Q9NNZ3 241 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 TPSG1Q9NRR2 321 aa17.29■□□□□ 0.36
TRIM54-202ENST00000380075 TNCP24821 2201 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 IGLC7A0M8Q6 106 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 OR7C2O60412 319 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 GATA2P23769 480 aaPredicted RBP17.28■□□□□ 0.36
TRIM54-202ENST00000380075 S100A2P29034 98 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 OR4X1Q8NH49 305 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 RITA1Q96K30 269 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 GAR1Q9NY12 217 aaKnown RBP17.28■□□□□ 0.36
TRIM54-202ENST00000380075 PITPNC1Q9UKF7 332 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 IGHV3-72A0A0B4J1Y9 119 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 A0A1W2PRE2 83 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 CORTO00230 105 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 BPIFB3P59826 476 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 PAX2Q02962 417 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 C11orf71Q6IPW1 123 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 TMEM37Q8WXS4 190 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 ZNF503Q96F45 646 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 SIGLEC9Q9Y336 463 aa17.28■□□□□ 0.36
TRIM54-202ENST00000380075 CSMD1Q96PZ7 3565 aa17.27■□□□□ 0.36
TRIM54-202ENST00000380075 COMPP49747 757 aaPredicted RBP17.27■□□□□ 0.36
TRIM54-202ENST00000380075 CRYGCP07315 174 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 OCC1Q8TAD7 63 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 NPIPB3Q92617 1050 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 LY6LH3BQJ8 138 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 COX7A2P2O60397 106 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 SOD3P08294 240 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 TNXAQ16473 311 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 TEX38Q6PEX7 206 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 HIST3H2BBQ8N257 126 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 C22orf15Q8WYQ4 148 aa17.26■□□□□ 0.35
TRIM54-202ENST00000380075 AKAP6Q13023 2319 aa17.25■□□□□ 0.35
TRIM54-202ENST00000380075 TRAV9-1A0A075B6T8 112 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms